RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ATP5OP48047 213 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 MAZP56270 477 aaKnown RBP16.34■□□□□ 0.21
LINC00404-201ENST00000418660 WNT3AP56704 352 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 DCDC1P59894 354 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ERVPABLB-1P60509 514 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ACTR1AP61163 376 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 C3orf38Q5JPI3 329 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 LRRC69Q6ZNQ3 347 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 SPRED1Q7Z699 444 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ARL14Q8N4G2 192 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 SPC24Q8NBT2 197 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 GPR26Q8NDV2 337 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 WDR36Q8NI36 951 aaKnown RBP16.34■□□□□ 0.21
LINC00404-201ENST00000418660 HERPUD2Q9BSE4 406 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ZSCAN5AQ9BUG6 496 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 SPATA16Q9BXB7 569 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 RMI1Q9H9A7 625 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ZNHIT2Q9UHR6 403 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 PCDHGA8Q9Y5G5 932 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ANKRD11Q6UB99 2663 aaPredicted RBP16.34■□□□□ 0.21
LINC00404-201ENST00000418660 ZZEF1O43149 2961 aa16.34■□□□□ 0.21
LINC00404-201ENST00000418660 CCDC187A0A096LP49 1063 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 RBL1P28749 1068 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 RBMS1P29558 406 aaKnown RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 TNNT3P45378 269 aaPredicted RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 INHBCP55103 352 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 B4GALNT1Q00973 533 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 OTUD4Q01804 1114 aaKnown RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 KIF5AQ12840 1032 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 MPP3Q13368 585 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 PDPK2PQ6A1A2 396 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 ZNF438Q7Z4V0 828 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 NAGSQ8N159 534 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 ACTL9Q8TC94 416 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 LIN37Q96GY3 246 aaPredicted RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 PRR11Q96HE9 360 aaPredicted RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 OXNAD1Q96HP4 312 aaPredicted RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 MRGPRX2Q96LB1 330 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 TMEM74Q96NL1 305 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 FERMT1Q9BQL6 677 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 CARD9Q9H257 536 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 TRABDQ9H4I3 376 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 ASCL3Q9NQ33 180 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 RALYQ9UKM9 306 aaKnown RBP16.33■□□□□ 0.2
LINC00404-201ENST00000418660 AMFRQ9UKV5 643 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 SPO11Q9Y5K1 396 aa16.33■□□□□ 0.2
LINC00404-201ENST00000418660 ZFHX4Q86UP3 3567 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 RHPN2P1A8MT19 583 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ZW10O43264 779 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 B4GAT1O43505 415 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 TJP3O95049 919 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 SLC4A1P02730 911 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 PYGMP11217 842 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 BPIP17213 487 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 CCKBRP32239 447 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ABCG1P45844 678 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 RP1P56715 2156 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ACACAQ13085 2346 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 NR1D2Q14995 579 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 SIRPB2Q5JXA9 342 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ZNF569Q5MCW4 686 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ALS2CLQ60I27 953 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 PEX26Q7Z412 305 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 B3GNT8Q7Z7M8 397 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 CDKL3Q8IVW4 592 aaPredicted RBP16.32■□□□□ 0.2
LINC00404-201ENST00000418660 SYCE1Q8N0S2 351 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 TRAM1L1Q8N609 369 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 PATE1Q8WXA2 126 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ALG3Q92685 438 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 SLC46A1Q96NT5 459 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 DESI2Q9BSY9 194 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 STRADBQ9C0K7 418 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 C10orf88Q9H8K7 445 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 TRIM39Q9HCM9 518 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 THSD1Q9NS62 852 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 RSPH14Q9UHP6 348 aa16.32■□□□□ 0.2
LINC00404-201ENST00000418660 PCYT1BQ9Y5K3 369 aaPredicted RBP16.32■□□□□ 0.2
LINC00404-201ENST00000418660 ADAMTS20P59510 1910 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 MACROD2A1Z1Q3 448 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 GOLGA6L6A8MZA4 724 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 MIF4GDA9UHW6 222 aaKnown RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 F5H423 210 aaPredicted RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 AURKAO14965 403 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 NUAK1O60285 661 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 SLC25A14O95258 325 aaPredicted RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 RBP3P10745 1247 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 HLA-DPA1P20036 260 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 ITPKBP27987 946 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 HMGCLP35914 325 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 MLLT3P42568 568 aaPredicted RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 GPR3P46089 330 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 PCBP4P57723 403 aaKnown RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 EIF3EP60228 445 aaKnown RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 EIF3IQ13347 325 aaKnown RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 BIRC2Q13490 618 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 ITPRIPL1Q6GPH6 555 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 AADACL2Q6P093 401 aa16.31■□□□□ 0.2
LINC00404-201ENST00000418660 CHST15Q7LFX5 561 aaPredicted RBP16.31■□□□□ 0.2
LINC00404-201ENST00000418660 SLC25A41Q8N5S1 370 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms