RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ARHGEF17Q96PE2 2063 aaPredicted RBP13.17□□□□□ -0.3
CTHRC1-202ENST00000415886 TLN1Q9Y490 2541 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 RELNP78509 3460 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 LOC101059948A0A1B0GTJ6 334 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 TTC24A2A3L6 582 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 BLACEA4D250 179 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 TRAFD1O14545 582 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 MATN3O15232 486 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 SPOPO43791 374 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 SOCS5O75159 536 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 CYP2A6P11509 494 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ZFXP17010 805 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 CCNCP24863 283 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 GARSP41250 739 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ARSEP51690 589 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ZNF75DP51815 510 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 NAP1L1P55209 391 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 MAXP61244 160 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 CTBSQ01459 385 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 CDC20Q12834 499 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 DCAF12Q5T6F0 453 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ARMC12Q5T9G4 340 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ZNF761Q86XN6 746 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 RHOT1Q8IXI2 618 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 UNC5BQ8IZJ1 945 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 FAM26EQ8N5C1 309 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 PSMG3-AS1Q96PY0 264 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 TEX101Q9BY14 249 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 FRMD8Q9BZ67 464 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 ASPSCR1Q9BZE9 553 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 POLR1EQ9GZS1 481 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 RBSNQ9H1K0 784 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 GPN2Q9H9Y4 310 aaPredicted RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 NOD2Q9HC29 1040 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 RBM22Q9NW64 420 aaKnown RBP eCLIP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 TRNAU1APQ9NX07 287 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 KCNK4Q9NYG8 393 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 PILRAQ9UKJ1 303 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 PLEKHM1Q9Y4G2 1056 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 HEY1Q9Y5J3 304 aa13.16□□□□□ -0.3
CTHRC1-202ENST00000415886 B4E171 279 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 APOL1O14791 398 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 MTA2O94776 668 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 MAP3K6O95382 1288 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 CPP00450 1065 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 CA4P22748 312 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 OAS2P29728 719 aaKnown RBP13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 TSPAN7P41732 249 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 POLD2P49005 469 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 EPHB1P54762 984 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 CDK3Q00526 305 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 CNGA3Q16281 694 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 ATP1A1-AS1Q5TC04 95 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 DENND2CQ68D51 928 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 NCBP2-AS2Q69YL0 99 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 RFX6Q8HWS3 928 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 NLGN4XQ8N0W4 816 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 BMPERQ8N8U9 685 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 TC2NQ8N9U0 490 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 NLGN4YQ8NFZ3 816 aaPredicted RBP13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 RTP4Q96DX8 246 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 MRFAP1L1Q96HT8 127 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 CTRCQ99895 268 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 MGME1Q9BQP7 344 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 KCTD5Q9NXV2 234 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 PHTF1Q9UMS5 762 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
CTHRC1-202ENST00000415886 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 GOLGA6BA6NDN3 693 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 CAPN5O15484 640 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 MFSD11O43934 449 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 PEX11BO96011 259 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 KRT1P04264 644 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 NR1D1P20393 614 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 ADCY8P40145 1251 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 ETV3P41162 512 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 ACTR1BP42025 376 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 PPM1FP49593 454 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 RAB15P59190 212 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 ACTR1AP61163 376 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 GALNT2Q10471 571 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 SQSTM1Q13501 440 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 DEFB109BQ30KR1 87 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 C4orf17Q53FE4 359 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 LACTB2Q53H82 288 aaPredicted RBP13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 SNAP47Q5SQN1 464 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 HIST2H2BCQ6DN03 193 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 TMEM71Q6P5X7 295 aa13.14□□□□□ -0.31
CTHRC1-202ENST00000415886 DOK6Q6PKX4 331 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms