RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 DPEP2Q9H4A9 486 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 ARNT2Q9HBZ2 717 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 TRIM39Q9HCM9 518 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 IL17CQ9P0M4 197 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 ZNHIT2Q9UHR6 403 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 TMEM98Q9Y2Y6 226 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 NEUROG3Q9Y4Z2 214 aa14.6□□□□□ -0.07
CHD1-202ENST00000414220 CNOT1A5YKK6 2376 aaKnown RBP14.6□□□□□ -0.07
CHD1-202ENST00000414220 GLYATL1P3A0A0U1RQE8 302 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 CPED1A4D0V7 1026 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 AURKAO14965 403 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 HYAL3O43820 417 aaPredicted RBP14.59□□□□□ -0.07
CHD1-202ENST00000414220 DKK1O94907 266 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 METTL18O95568 372 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 JUPP14923 745 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 TCP1P17987 556 aaKnown RBP14.59□□□□□ -0.07
CHD1-202ENST00000414220 POLD2P49005 469 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 DHRS13Q6UX07 377 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 MARK2Q7KZI7 788 aaKnown RBP14.59□□□□□ -0.07
CHD1-202ENST00000414220 TTC30BQ8N4P2 665 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 WDR48Q8TAF3 677 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 GLYATL1Q969I3 302 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 EID2BQ96D98 161 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 VPS35Q96QK1 796 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 WDR24Q96S15 920 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 C19orf43Q9BQ61 176 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 SCNM1Q9BWG6 230 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 TOR4AQ9NXH8 423 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 PNMA8BQ9ULN7 279 aaPredicted RBP14.59□□□□□ -0.07
CHD1-202ENST00000414220 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
CHD1-202ENST00000414220 PADI4Q9UM07 663 aa14.59□□□□□ -0.07
CHD1-202ENST00000414220 COL5A1P20908 1838 aaPredicted RBP14.59□□□□□ -0.07
CHD1-202ENST00000414220 LRRK1Q38SD2 2015 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 EME2A4GXA9 379 aaPredicted RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 FADS2P1A8MWK0 482 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 PGRMC1O00264 195 aaKnown RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 CES2O00748 559 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 VEGFDO43915 354 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 USP12O75317 370 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 ATP1A1P05023 1023 aaKnown RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 ADCY8P40145 1251 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 GNG11P61952 73 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 CDH17Q12864 832 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 SPARCL1Q14515 664 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 TCEA2Q15560 299 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 LDLRAP1Q5SW96 308 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 KCTD11Q693B1 232 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 TMPRSS7Q7RTY8 843 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 EFL1Q7Z2Z2 1120 aaKnown RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 TRIM74Q86UV6 250 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 KLHDC8BQ8IXV7 354 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 RASGEF1CQ8N431 466 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 IFI44Q8TCB0 444 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 GPBAR1Q8TDU6 330 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 SCARF2Q96GP6 870 aaPredicted RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 OSBPL9Q96SU4 736 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 GORASP1Q9BQQ3 440 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 ETNK1Q9HBU6 452 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 RAB6BQ9NRW1 208 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 SIRPGQ9P1W8 387 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 MSRB2Q9Y3D2 182 aa14.58□□□□□ -0.08
CHD1-202ENST00000414220 TP53BP1Q12888 1972 aaPredicted RBP14.58□□□□□ -0.08
CHD1-202ENST00000414220 GRID2O43424 1007 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 NUAK1O60285 661 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 CDK14O94921 469 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 SLC2A4P14672 509 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 VCLP18206 1134 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 ACTR1BP42025 376 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 ACTR1AP61163 376 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 SARNPP82979 210 aaKnown RBP14.57□□□□□ -0.08
CHD1-202ENST00000414220 CTBSQ01459 385 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 SIX1Q15475 284 aaPredicted RBP14.57□□□□□ -0.08
CHD1-202ENST00000414220 PYCR3Q53H96 274 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 SLC35F3Q8IY50 421 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 TAB3Q8N5C8 712 aaPredicted RBP14.57□□□□□ -0.08
CHD1-202ENST00000414220 OR4K2Q8NGD2 314 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 MAPK15Q8TD08 544 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 ZNF398Q8TD17 642 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 ACTRT1Q8TDG2 376 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 GRK7Q8WTQ7 553 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 STN1Q9H668 368 aaKnown RBP14.57□□□□□ -0.08
CHD1-202ENST00000414220 IL26Q9NPH9 171 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 CNOT6Q9ULM6 557 aaKnown RBP14.57□□□□□ -0.08
CHD1-202ENST00000414220 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 ARL5AQ9Y689 179 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 SLC30A1Q9Y6M5 507 aa14.57□□□□□ -0.08
CHD1-202ENST00000414220 FAM221BA6H8Z2 402 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 B4DGG1 531 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 BUD23O43709 281 aaKnown RBP14.56□□□□□ -0.08
CHD1-202ENST00000414220 APRTP07741 180 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 CELA2BP08218 269 aaPredicted RBP14.56□□□□□ -0.08
CHD1-202ENST00000414220 RALBP11234 206 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 ITGALP20701 1170 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 BASP1P80723 227 aaKnown RBP14.56□□□□□ -0.08
CHD1-202ENST00000414220 SEMA5AQ13591 1074 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 SEPT6Q14141 434 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 SMAD1Q15797 465 aaKnown RBP14.56□□□□□ -0.08
CHD1-202ENST00000414220 SKIDA1Q1XH10 827 aa14.56□□□□□ -0.08
CHD1-202ENST00000414220 ATP13A5Q4VNC0 1218 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms