RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF276Q8N554 614 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 MRPL43Q8N983 215 aaKnown RBP9.38□□□□□ -0.91
SNHG3-201ENST00000413987 SMG8Q8ND04 991 aaKnown RBP9.38□□□□□ -0.91
SNHG3-201ENST00000413987 DDI1Q8WTU0 396 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 ZDHHC1Q8WTX9 485 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 ATG4AQ8WYN0 398 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 SPACA9Q96E40 222 aaPredicted RBP9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PWWP2AQ96N64 755 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PANX3Q96QZ0 392 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 POLE3Q9NRF9 147 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 UCKL1Q9NWZ5 548 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 TUBA8Q9NY65 449 aaPredicted RBP9.38□□□□□ -0.91
SNHG3-201ENST00000413987 KCNK4Q9NYG8 393 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 TUBGCP4Q9UGJ1 667 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 TLK1Q9UKI8 766 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PLA2G4CQ9UP65 541 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 SZT2Q5T011 3432 aa9.38□□□□□ -0.91
SNHG3-201ENST00000413987 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 OR6C65A6NJZ3 312 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ADRA1DP25100 572 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 KLRC2P26717 231 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TAGLN2P37802 199 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CD97P48960 835 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CAMLGP49069 296 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ZNF143P52747 638 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 YWHAZP63104 245 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 PHEXP78562 749 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CHIT1Q13231 466 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 DAG1Q14118 895 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TBCEQ15813 527 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 KLHL38Q2WGJ6 581 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 P3H1Q32P28 736 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SLC44A4Q53GD3 710 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CDCP2Q5VXM1 449 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 PDPK2PQ6A1A2 396 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 FBXO46Q6PJ61 603 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 FAM126BQ8IXS8 530 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CARFQ8N187 725 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SLC2A13Q96QE2 648 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 FBXO6Q9NRD1 293 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SUSD2Q9UGT4 822 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CCL27Q9Y4X3 112 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 BACE2Q9Y5Z0 518 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 PSAT1Q9Y617 370 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CITO14578 2027 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 A0A1W2PPM1 405 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 STX16-NPEPL1H3BU86 382 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 KLF11O14901 512 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TNFRSF6BO95407 300 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ITGB3P05106 788 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TMEM191BP0C7N4 346 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ENDOUP21128 410 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 RPL9P32969 192 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 PITPNBP48739 271 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CCL23P55773 120 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 B2MP61769 119 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 PRKD1Q15139 912 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CCDC142Q17RM4 750 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TRIM60Q495X7 471 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 MDH1BQ5I0G3 518 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 FAXCQ5TGI0 409 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 BORAQ6PGQ7 559 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 RBM44Q6ZP01 1051 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 MON1AQ86VX9 555 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 GRAMD2AQ8IUY3 354 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 RBM15BQ8NDT2 890 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TCP10LQ8TDR4 215 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 GANCQ8TET4 914 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 ABTB1Q969K4 478 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 C11orf24Q96F05 449 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 FAM111AQ96PZ2 611 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 PCDHB18PQ96TA0 734 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 CYTH2Q99418 400 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 LBHD1Q9BQE6 289 aaPredicted RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 THTPAQ9BU02 230 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 MRPS26Q9BYN8 205 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 GSX2Q9BZM3 304 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 TRIM2Q9C040 744 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SLC7A8Q9UHI5 535 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 NOCTQ9UK39 431 aaKnown RBP9.37□□□□□ -0.91
SNHG3-201ENST00000413987 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 EYSQ5T1H1 3165 aa9.37□□□□□ -0.91
SNHG3-201ENST00000413987 A0A1W2PRV1 198 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 WDR91A4D1P6 747 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ANKRD34BA5PLL1 514 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ZW10O43264 779 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 TLL1O43897 1013 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 DLX3O60479 287 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 FAM155BO75949 473 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 CLPTM1O96005 669 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 ANXA6P08133 673 aa9.36□□□□□ -0.91
SNHG3-201ENST00000413987 MYL2P10916 166 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms