RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 TTC39CQ8N584 583 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 THAP6Q8TBB0 222 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 RHBDF1Q96CC6 855 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ORAI1Q96D31 301 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 EGLN2Q96KS0 407 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 NCAPGQ9BPX3 1015 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 SYNCQ9H7C4 482 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMEM30AQ9NV96 361 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 MTMR10Q9NXD2 777 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF580Q9UK33 172 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 AMDHD2Q9Y303 409 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 LOXL2Q9Y4K0 774 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 SESN1Q9Y6P5 492 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 KIF21AQ7Z4S6 1674 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 A0A1B0GUV1 79 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 KANSL1LA0AUZ9 987 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 EME2A4GXA9 379 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 LILRA5A6NI73 299 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF587BE7ETH6 402 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 MAP2K7O14733 419 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 ATP2A1O14983 1001 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 HIST1H2ABP04908 130 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 GABRB1P18505 474 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 HIST1H2ADP20671 130 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 S1PR1P21453 382 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 UGT1A1P22309 533 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 HADHAP40939 763 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 APOBEC1P41238 236 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 GARSP41250 739 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 CDH8P55286 799 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 ILF3Q12906 894 aaKnown RBP eCLIP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 MAD2L1Q13257 205 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 SLC39A14Q15043 492 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 KCNT1Q5JUK3 1230 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 RARS2Q5T160 578 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 SPATA1Q5VX52 437 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 FAM205BPQ63HN1 556 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 CAPRIN2Q6IMN6 1127 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 RGMBQ6NW40 437 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 PAPD4Q6PIY7 484 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 CHST9Q7L1S5 443 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 HIST3H2AQ7L7L0 130 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 C1orf87Q8N0U7 546 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 SMRP1Q8NCR6 262 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 LMO3Q8TAP4 145 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 NSUN4Q96CB9 384 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMEM19Q96HH6 336 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 BARD1Q99728 777 aaKnown RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 C1QTNF4Q9BXJ3 329 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 SLCO5A1Q9H2Y9 848 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 GHITMQ9H3K2 345 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 EBF2Q9HAK2 575 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 SETD4Q9NVD3 440 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 OR14J1Q9UGF5 321 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMEM184BQ9Y519 407 aaPredicted RBP3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 PCDHGB1Q9Y5G3 927 aa3.76□□□□□ -1.81
HMGB1P11-201ENST00000413899 ARHGEF40Q8TER5 1519 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 CGNL1Q0VF96 1302 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 CFTRP13569 1480 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 A6NCN8 305 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 FAM90A26D6RGX4 464 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 PTGES3LE9PB15 166 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 HS3ST1O14792 307 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 VILLO15195 856 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 SMAD9O15198 467 aaKnown RBP3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 KCNN4O15554 427 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 HS6ST1O60243 411 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 ICAM1P05362 532 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 SRPRAP08240 638 aaKnown RBP3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 TGFB3P10600 412 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 MCM3P25205 808 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 CAMPP49913 170 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 SREBF2Q12772 1141 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 MEA1Q16626 185 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 MYLK3Q32MK0 819 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 DUSP28Q4G0W2 176 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 PLEKHS1Q5SXH7 462 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 C18orf63Q68DL7 685 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 ITPRIPL1Q6GPH6 555 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 SPSB3Q6PJ21 355 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 GFRALQ6UXV0 394 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 BRINP3Q76B58 766 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 SATL1Q86VE3 508 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF34Q8IZ26 560 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 HJURPQ8NCD3 748 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 OR1J2Q8NGS2 313 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 LNX1Q8TBB1 728 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 FIG4Q92562 907 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 ABTB1Q969K4 478 aaPredicted RBP3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 IGSF21Q96ID5 467 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 QRFPRQ96P65 431 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 MTERF1Q99551 399 aaKnown RBP3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 CMKLR1Q99788 373 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMEM39BQ9GZU3 492 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 PIGMQ9H3S5 423 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 UBTD1Q9HAC8 227 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 KLHL1Q9NR64 748 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 OGFRQ9NZT2 677 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 COPG2Q9UBF2 871 aa3.75□□□□□ -1.81
HMGB1P11-201ENST00000413899 STK39Q9UEW8 545 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms