RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TMTC3Q6ZXV5 915 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 SCXQ7RTU7 201 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 GATAD2AQ86YP4 633 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 CFAP52Q8N1V2 620 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 NEXN-AS1Q8NBZ9 246 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PPHLN1Q8NEY8 458 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 EXD1Q8NHP7 514 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 GABPB2Q8TAK5 448 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 AGAP11Q8TF27 550 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PCNPQ8WW12 178 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLCO4A1Q96BD0 722 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 R3HDM4Q96D70 268 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ARSGQ96EG1 525 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 RNF145Q96MT1 663 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ACAP3Q96P50 834 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ELF4Q99607 663 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TM2D3Q9BRN9 247 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 LIMD2Q9BT23 127 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZSCAN5AQ9BUG6 496 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TUBB2BQ9BVA1 445 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TMEM222Q9H0R3 208 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 UBQLN3Q9H347 655 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 POLD4Q9HCU8 107 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 MAP3K20Q9NYL2 800 aaKnown RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 FLRT3Q9NZU0 649 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRSS50Q9UI38 385 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 DNPEPQ9ULA0 475 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 TTC7AQ9ULT0 858 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 MTF2Q9Y483 593 aaPredicted RBP-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 ASB3Q9Y575 518 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 SPACA6W5XKT8 324 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 CPAMD8Q8IZJ3 1885 aa-1.57□□□□□ -2.66
RNU4-88P-201ENST00000411220 MED12Q93074 2177 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PTPRCP08575 1304 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGKV3-7A0A075B6H7 116 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 IGHV3OR16-10A0A075B7F0 116 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 VWA3AA6NCI4 1184 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 I6L893 689 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 UPK2O00526 184 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PPP1R12AO14974 1030 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ADAM20O43506 726 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRC1O43663 620 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PCDH8O95206 1070 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 RECKO95980 971 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ACTL6AO96019 429 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 HPP00738 406 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 GNAI2P04899 355 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 DANCRP0C864 163 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 APEHP13798 732 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ACAT1P24752 427 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 DNASE1P24855 282 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CNTFRP26992 372 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 HOXA7P31268 230 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PRKAR2BP31323 418 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CHRNA3P32297 505 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PPP3CCP48454 512 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 GPR143P51810 404 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 NKX2-5P52952 324 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 DEFA1P59665 94 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZP1P60852 638 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 HERVK_113P61574 105 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 POU6F2P78424 691 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ADORA2A-AS1P86434 159 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PPARAQ07869 468 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 NSUN2Q08J23 767 aaKnown RBP eCLIP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 SLC14A1Q13336 389 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ITGADQ13349 1161 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CDH18Q13634 790 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 DHX8Q14562 1220 aaKnown RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 EFNB3Q15768 340 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZIC1Q15915 447 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ACKR1Q16570 336 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF181Q2M3W8 571 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CDONQ4KMG0 1287 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 TOR1AIP1Q5JTV8 583 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ATAD3CQ5T2N8 411 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 CCDC181Q5TID7 509 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 AGAP7PQ5VUJ5 663 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 DCAF12L2Q5VW00 463 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 KIAA1841Q6NSI8 718 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 UNQ6494/PRO21346Q6UXR6 183 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 OTOP1Q7RTM1 612 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 PDSS2Q86YH6 399 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF695Q8IW36 515 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 GLB1L2Q8IW92 636 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 KDM8Q8N371 416 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 TMEM57Q8N5G2 664 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 MYCT1Q8N699 235 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 METTL27Q8N6F8 245 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZFP41Q8N8Y5 198 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 SYT2Q8N9I0 419 aaPredicted RBP-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF114Q8NC26 417 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 KCTD6Q8NC69 237 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNRF1Q8ND25 227 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 ZNF439Q8NDP4 499 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR2L5Q8NG80 312 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR2L8Q8NGY9 312 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 OR52P1PQ8NH57 321 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 GATAD1Q8WUU5 269 aa-1.58□□□□□ -2.66
RNU4-88P-201ENST00000411220 SOCS4Q8WXH5 440 aa-1.58□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms