RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 RMI1Q9H9A7 625 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 BPIFA1Q9NP55 256 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 MRPL40Q9NQ50 206 aaKnown RBP10.83□□□□□ -0.68
CHMP3-205ENST00000409810 RAB6BQ9NRW1 208 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 TRNAU1APQ9NX07 287 aaKnown RBP10.83□□□□□ -0.68
CHMP3-205ENST00000409810 IL17CQ9P0M4 197 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 VPS18Q9P253 973 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 PNMA8BQ9ULN7 279 aaPredicted RBP10.83□□□□□ -0.68
CHMP3-205ENST00000409810 SUFUQ9UMX1 484 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 ARL5AQ9Y689 179 aa10.83□□□□□ -0.68
CHMP3-205ENST00000409810 RP1P56715 2156 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 GLYATL1P3A0A0U1RQE8 302 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 TRIM38O00635 465 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 PHF2O75151 1096 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 RFPL3O75679 317 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 SUN1O94901 812 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 SLC25A14O95258 325 aaPredicted RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 APRTP07741 180 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 ETS1P14921 441 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 CKMT2P17540 419 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 ACP1P24666 158 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 GNPDA1P46926 289 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 KCNJ1P48048 391 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 FNTAP49354 379 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 BASP1P80723 227 aaKnown RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 OLIG2Q13516 323 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 LRP8Q14114 963 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 NR0B2Q15466 257 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 CYP1B1Q16678 543 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 PROX2Q3B8N5 592 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 PAPD7Q5XG87 772 aaKnown RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 CCDC137Q6PK04 289 aaKnown RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 TAF8Q7Z7C8 310 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 TRIM74Q86UV6 250 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 DNAAF3Q8N9W5 541 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 GLYATL1Q969I3 302 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 APOLD1Q96LR9 279 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 OR2M4Q96R27 311 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 AP1M1Q9BXS5 423 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 ZCCHC2Q9C0B9 1178 aaKnown RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 TRIM39Q9HCM9 518 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 EIF2B3Q9NR50 452 aaKnown RBP10.82□□□□□ -0.68
CHMP3-205ENST00000409810 SAR1BQ9Y6B6 198 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 PTPRBP23467 1997 aa10.82□□□□□ -0.68
CHMP3-205ENST00000409810 PIKFYVEQ9Y2I7 2098 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 YY2O15391 372 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 PRAMEF1O95521 474 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 ZSCAN5DPP0CG00 497 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 GIMD1P0DJR0 217 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 CKMT1AP12532 417 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 RPL22P35268 128 aaKnown RBP10.81□□□□□ -0.68
CHMP3-205ENST00000409810 COILP38432 576 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-205ENST00000409810 ACADVLP49748 655 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 ZNF140P52738 457 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-205ENST00000409810 SARNPP82979 210 aaKnown RBP10.81□□□□□ -0.68
CHMP3-205ENST00000409810 FOXC1Q12948 553 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 GTF2H3Q13889 308 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 SEPT6Q14141 434 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 LDLRAP1Q5SW96 308 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 DENND5AQ6IQ26 1287 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 FAM151BQ6UXP7 276 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 ARL10Q8N8L6 244 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 OR4K2Q8NGD2 314 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 GDAP1Q8TB36 358 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 STYXQ8WUJ0 223 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 ADAMTS14Q8WXS8 1223 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 TTC25Q96NG3 672 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 RUNDC3BQ96NL0 473 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 BOCQ9BWV1 1114 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 CLPBQ9H078 707 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 TMEM168Q9H0V1 697 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 SUDS3Q9H7L9 328 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-205ENST00000409810 SMOXQ9NWM0 555 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 RNF14Q9UBS8 474 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 CNOT6Q9ULM6 557 aaKnown RBP10.81□□□□□ -0.68
CHMP3-205ENST00000409810 GPR34Q9UPC5 381 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 TMEM98Q9Y2Y6 226 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 GPSM3Q9Y4H4 160 aa10.81□□□□□ -0.68
CHMP3-205ENST00000409810 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.8□□□□□ -0.68
CHMP3-205ENST00000409810 MED19A0JLT2 244 aaPredicted RBP10.8□□□□□ -0.68
CHMP3-205ENST00000409810 HEATR9A2RTY3 570 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ZNF185O15231 689 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 BUD23O43709 281 aaKnown RBP10.8□□□□□ -0.68
CHMP3-205ENST00000409810 VEGFDO43915 354 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 DNAJC6O75061 913 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ECEL1O95672 775 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 KRT14P02533 472 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 GP1BAP07359 652 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 CELA2BP08218 269 aaPredicted RBP10.8□□□□□ -0.68
CHMP3-205ENST00000409810 TPSB2P20231 275 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ITGALP20701 1170 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 PMLP29590 882 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 ADCY8P40145 1251 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 PAFAH1B1P43034 410 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 POLD2P49005 469 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 CDK16Q00536 496 aa10.8□□□□□ -0.68
CHMP3-205ENST00000409810 E2F1Q01094 437 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms