RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 STX8Q9UNK0 236 aa4.51□□□□□ -1.69
CLK1-203ENST00000409769 COL11A1P12107 1806 aaPredicted RBP4.51□□□□□ -1.69
CLK1-203ENST00000409769 STK36Q9NRP7 1315 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 A0A0G2JMZ2 1700 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 GOLGA6L10A0A0M3HER8 536 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 RPS10-NUDT3A0A1W2PQS6 291 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 SH2D7A6NKC9 451 aaPredicted RBP4.5□□□□□ -1.69
CLK1-203ENST00000409769 FAM157AC9JC47 383 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 H0YGN5 161 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 EIF3FO00303 357 aaPredicted RBP4.5□□□□□ -1.69
CLK1-203ENST00000409769 MPHOSPH10O00566 681 aaKnown RBP4.5□□□□□ -1.69
CLK1-203ENST00000409769 HSPB6O14558 160 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CYTH3O43739 400 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 JAK2O60674 1132 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 PLEKHA8P1O95397 391 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CHRM4P08173 479 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 IFNAR1P17181 557 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 TNFRSF8P28908 595 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 GJB2P29033 226 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 GPR12P47775 334 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CENPAP49450 140 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 ENTPD1P49961 510 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CCR5P51681 352 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 ROR2Q01974 943 aaKnown RBP4.5□□□□□ -1.69
CLK1-203ENST00000409769 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.5□□□□□ -1.69
CLK1-203ENST00000409769 SLC12A1Q13621 1099 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 KEAP1Q14145 624 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 NAA35Q5VZE5 725 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 NAPEPLDQ6IQ20 393 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 TMTC3Q6ZXV5 915 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 SRBD1Q8N5C6 995 aaKnown RBP4.5□□□□□ -1.69
CLK1-203ENST00000409769 LRRC57Q8N9N7 239 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 TEX45Q8NA69 505 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 MYRIPQ8NFW9 859 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 ACER1Q8TDN7 264 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CD180Q99467 661 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CLSTN3Q9BQT9 956 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 KAT14Q9H8E8 782 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 CLIP2Q9UDT6 1046 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 GJD2Q9UKL4 321 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 RAP2CQ9Y3L5 183 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 EVPLQ92817 2033 aa4.5□□□□□ -1.69
CLK1-203ENST00000409769 PASKQ96RG2 1323 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 CCDC196A0A1B0GTZ2 297 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 F5H6K3 240 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 STMND1H3BQB6 276 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
CLK1-203ENST00000409769 KLK10O43240 276 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 SPRY3O43610 288 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 NDUFB10O96000 172 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 LCATP04180 440 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 WEE2P0C1S8 567 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 NF2P35240 595 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 AVPR1AP37288 418 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 DPP6P42658 865 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 GPD2P43304 727 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 FKBP1BP68106 108 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 HMGN5P82970 282 aaKnown RBP4.49□□□□□ -1.69
CLK1-203ENST00000409769 LTBQ06643 244 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 KLRC3Q07444 240 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 BIRC3Q13489 604 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 VGLL4Q14135 290 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 SLC18A3Q16572 532 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 ASPRV1Q53RT3 343 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 DCAF12L2Q5VW00 463 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 GSG1LQ6UXU4 331 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 MOB2Q70IA6 237 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 ZNF354CQ86Y25 554 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 RBFAQ8N0V3 343 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 CPXCR1Q8N123 301 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
CLK1-203ENST00000409769 CTCFLQ8NI51 663 aaPredicted RBP4.49□□□□□ -1.69
CLK1-203ENST00000409769 ELP5Q8TE02 316 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 NUDCD2Q8WVJ2 157 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 RAB40AQ8WXH6 277 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 USP13Q92995 863 aaPredicted RBP4.49□□□□□ -1.69
CLK1-203ENST00000409769 ZKSCAN4Q969J2 545 aaPredicted RBP4.49□□□□□ -1.69
CLK1-203ENST00000409769 C12orf42Q96LP6 360 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 SPZ1Q9BXG8 430 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 VCPKMTQ9H867 229 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 NLKQ9UBE8 527 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 CDH22Q9UJ99 828 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 SMC3Q9UQE7 1217 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 CNPY2Q9Y2B0 182 aa4.49□□□□□ -1.69
CLK1-203ENST00000409769 RBBP6Q7Z6E9 1792 aaKnown RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 C17orf113A0A1B0GUU1 675 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 TARSL2A2RTX5 802 aaKnown RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 CLEC18AA5D8T8 446 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 C19orf81C9J6K1 198 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 KLRF2D3W0D1 207 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 PEX12O00623 359 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 CPLX1O14810 134 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 SOX30O94993 753 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 DEXIO95424 95 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 ADAP00813 363 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 HSP90AA1P07900 732 aaKnown RBP4.48□□□□□ -1.69
CLK1-203ENST00000409769 HOXC6P09630 235 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 GOLGA8HP0CJ92 632 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 PLA2G2AP14555 144 aa4.48□□□□□ -1.69
CLK1-203ENST00000409769 SYT1P21579 422 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms