RNA–Protein interactions for RNA: ENST00000409198.5

NEB-204, Transcript of nebulin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEB, Length 20,637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-204ENST00000409198 NEK3P51956 506 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 CAP1Q01518 475 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 METTL7BQ6UX53 244 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 CLPTM1LQ96KA5 538 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 OR10A4Q9H209 315 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 DENND2DQ9H6A0 471 aaPredicted RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 JMJD4Q9H9V9 463 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 ETNK1Q9HBU6 452 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 HIF1ANQ9NWT6 349 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 GTF3C4Q9UKN8 822 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 POFUT2Q9Y2G5 429 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 R3HDM2Q9Y2K5 976 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 NFASCO94856 1347 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 RGSL1A5PLK6 1076 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 OR14I1A6ND48 311 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PDIA5Q14554 519 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 KHDC1LQ5JSQ8 128 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 OLFML1Q6UWY5 402 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 DENND5BQ6ZUT9 1274 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 METTL16Q86W50 562 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 SMYD4Q8IYR2 804 aaPredicted RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 DNERQ8NFT8 737 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 MCRS1Q96EZ8 462 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PGAP3Q96FM1 320 aaPredicted RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 SLC25A23Q9BV35 468 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 EURLQ9NYK6 297 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 ZNF639Q9UID6 485 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PIP5K1CO60331 668 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 TOB1P50616 345 aaPredicted RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 OTUD4Q01804 1114 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 ZNF100Q8IYN0 542 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 ARMC10Q8N2F6 343 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 NAT16Q8N8M0 369 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 BPIFA3Q9BQP9 254 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PUS3Q9BZE2 481 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 TTC26A0AVF1 554 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 E2F8A0AVK6 867 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 TGFB3P10600 412 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 FSHRP23945 695 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 MMP13P45452 471 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 ZNF84P51523 738 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 FKBP1BP68106 108 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 MALLQ13021 153 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 NAB1Q13506 487 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 EFR3AQ14156 821 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PUM1Q14671 1186 aaKnown RBP eCLIP3.38□□□□□ -1.87
NEB-204ENST00000409198 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 RASGEF1CQ8N431 466 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 SLC5A11Q8WWX8 675 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PCDH12Q9NPG4 1184 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 MTMR10Q9NXD2 777 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 MRPS7Q9Y2R9 242 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 MAP3K4Q9Y6R4 1608 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 PZPP20742 1482 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 ISPDA4D126 451 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 OR6C75A6NL08 312 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 CHST10O43529 356 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 RARGP13631 454 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 FASP25445 335 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 CLCN3P51790 818 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 SLC27A1Q6PCB7 646 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 KYAT3Q6YP21 454 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 CHST9Q7L1S5 443 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 TMEM126BQ8IUX1 230 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 GJD3Q8N144 294 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 BOLLQ8N9W6 283 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 ZNF471Q9BX82 626 aaPredicted RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 DDX18Q9NVP1 670 aaKnown RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 SSR3Q9UNL2 185 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 CLCA3PQ9Y6N3 262 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 AP2A1O95782 977 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 SLC6A9P48067 706 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 CXCR3P49682 368 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 RAB28P51157 221 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 GARNL3Q5VVW2 1013 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 SLC8B1Q6J4K2 584 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 GPR156Q8NFN8 814 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 LCN9Q8WX39 176 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 C11orf84Q9BUA3 381 aaPredicted RBP3.38□□□□□ -1.87
NEB-204ENST00000409198 MLXIPLQ9NP71 852 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 KLRF1Q9NZS2 232 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 MGAT4CQ9UBM8 478 aa3.38□□□□□ -1.87
NEB-204ENST00000409198 IGHEP01854 428 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 ALPIP09923 528 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 SPANXN3Q5MJ09 141 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 NOXRED1Q6NXP6 359 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 MYDGFQ969H8 173 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 SYT4Q9H2B2 425 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 CROTQ9UKG9 612 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 AP1M2Q9Y6Q5 423 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 ALDH4A1P30038 563 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 CD151P48509 253 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 CDH4P55283 916 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 VLDLRP98155 873 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 TIGD5Q53EQ6 642 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 ACAD10Q6JQN1 1059 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 STRA8Q7Z7C7 330 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 LRRC17Q8N6Y2 441 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 NEDD4LQ96PU5 975 aa3.37□□□□□ -1.87
NEB-204ENST00000409198 RBM15Q96T37 977 aaKnown RBP eCLIP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms