RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 C9orf64Q5T6V5 341 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CST9Q5W186 159 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 AADACL2Q6P093 401 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MED27Q6P2C8 311 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MACC1Q6ZN28 852 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MON1BQ7L1V2 547 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 APTXQ7Z2E3 356 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 FAM220AQ7Z4H9 259 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 FBXO25Q8TCJ0 367 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 KCTD4Q8WVF5 259 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NCSTNQ92542 709 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RBM18Q96H35 190 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 C5orf34Q96MH7 638 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF576Q9H609 170 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RXFP1Q9HBX9 757 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CRTAC1Q9NQ79 661 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 THAP1Q9NVV9 213 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NUDT4Q9NZJ9 180 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MTRRQ9UBK8 725 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 HEY2Q9UBP5 337 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CIDEBQ9UHD4 219 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 VWA7Q9Y334 891 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 GRIN2DO15399 1336 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TGM5O43548 720 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 SLC28A2O43868 658 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PDE9AO76083 593 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PLGP00747 810 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 FCGR1AP12314 374 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 POLD2P49005 469 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ERFP50548 548 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MTAPQ13126 283 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 LPAL2Q16609 132 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PITRM1Q5JRX3 1037 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 HECTD2Q5U5R9 776 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 BROXQ5VW32 411 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 DNAJC14Q6Y2X3 702 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 GALNT7Q86SF2 657 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TDHQ8IZJ6 230 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF366Q8N895 744 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MOSPD2Q8NHP6 518 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RDH11Q8TC12 318 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MR1Q95460 341 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 LACRTQ9GZZ8 138 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 GDAP2Q9NXN4 497 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 SERTAD3Q9UJW9 196 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CROTQ9UKG9 612 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 FBXW2Q9UKT8 454 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CDH7Q9ULB5 785 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF8P17098 575 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PIK3R1P27986 724 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PNLIPRP1P54315 467 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RPS21P63220 83 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NAE1Q13564 534 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 RUNX3Q13761 415 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NAA30Q147X3 362 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CPSF6Q16630 551 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ARHGAP40Q5TG30 622 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 C22orf39Q6P5X5 142 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 C16orf87Q6PH81 154 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PYROXD2Q8N2H3 581 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CDYL2Q8N8U2 506 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ATP6V1C2Q8NEY4 427 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 CCM2Q9BSQ5 444 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TAPBPLQ9BX59 468 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 SLITRK2Q9H156 845 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 LDAHQ9H6V9 325 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 AP3D1O14617 1153 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 TEX28O15482 410 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 VEGFDO43915 354 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ATG7O95352 703 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PRKCGP05129 697 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 HNF1BP35680 557 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NR1D2Q14995 579 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NCF4Q15080 339 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 PLEKHA7Q6IQ23 1121 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 SNX20Q7Z614 316 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 OR52K2Q8NGK3 314 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 MDM1Q8TC05 714 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ADAMTS15Q8TE58 950 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 NTPCRQ9BSD7 190 aaKnown RBP4.99□□□□□ -1.61
SCN3A-203ENST00000409101 UGT2B28Q9BY64 529 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 FGFBP2Q9BYJ0 223 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 ZDHHC7Q9NXF8 308 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 FBXO5Q9UKT4 447 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 BACE2Q9Y5Z0 518 aa4.99□□□□□ -1.61
SCN3A-203ENST00000409101 SHPRHQ149N8 1683 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 PLCH1Q4KWH8 1693 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 FAM237AA0A1B0GTK4 181 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TPST1O60507 370 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 RNGTTO60942 597 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 GOT2P00505 430 aaKnown RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF30P17039 623 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 MMP8P22894 467 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 TPP2P29144 1249 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-203ENST00000409101 S100A5P33763 92 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NSG1P42857 185 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 KCNQ1P51787 676 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 DMWDQ09019 674 aa4.98□□□□□ -1.61
SCN3A-203ENST00000409101 NOMO1Q15155 1222 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms