RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 LINGO1Q96FE5 620 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 ZBED3Q96IU2 234 aaPredicted RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 MRGPRX2Q96LB1 330 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 ONECUT3O60422 494 aaPredicted RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 RAMP2O60895 175 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 APOA4P06727 396 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 AGXTP21549 392 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 FSHRP23945 695 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 POU1F1P28069 291 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 PCSK1P29120 753 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 MAGEA3P43357 314 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 GSK3BP49841 420 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 GATMP50440 423 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 MERTKQ12866 999 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 TAF1CQ15572 869 aaPredicted RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 C6orf183Q5T699 404 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 PTRHD1Q6GMV3 140 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 C4orf22Q6V702 233 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 ZDHHC17Q8IUH5 632 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 TTC30BQ8N4P2 665 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 OR10T2Q8NGX3 314 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 PSMA8Q8TAA3 256 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 HPS1Q92902 700 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 ISOC1Q96CN7 298 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 HNRNPABQ99729 332 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 CHID1Q9BWS9 393 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 TDRD1Q9BXT4 1180 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 GPR63Q9BZJ6 419 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 C6orf62Q9GZU0 229 aaPredicted RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 GKN1Q9NS71 199 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 TBC1D13Q9NVG8 400 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 VTI1BQ9UEU0 232 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 FKBPLQ9UIM3 349 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 TRMT6Q9UJA5 497 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 ANAPC2Q9UJX6 822 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 RAB26Q9ULW5 256 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 DNAJC15Q9Y5T4 150 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 SNX8Q9Y5X2 465 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 PABPN1LA6NDY0 278 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 A6NL46 340 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 M0R3G1 203 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 CYP7B1O75881 506 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 FADS2O95864 444 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 MYL4P12829 197 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 LBPP18428 481 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 GJA5P36382 358 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 SLC26A2P50443 739 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 NEK2P51955 445 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 PKDCCQ504Y2 493 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 ATXN7L2Q5T6C5 722 aaPredicted RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 STEAP4Q687X5 459 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 TMEM207Q6UWW9 146 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 RNF19BQ6ZMZ0 732 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 THEM5Q8N1Q8 247 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 PPTC7Q8NI37 304 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 RTP4Q96DX8 246 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 BTBD9Q96Q07 612 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 EBPLQ9BY08 206 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 OSBPL6Q9BZF3 934 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 STN1Q9H668 368 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 RUBCNLQ9H714 662 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 EXOSC4Q9NPD3 245 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 OLA1Q9NTK5 396 aaKnown RBP8.29□□□□□ -1.08
SNX13-201ENST00000409076 KIF17Q9P2E2 1029 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 HSFX1Q9UBD0 423 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 HS3ST4Q9Y661 456 aa8.29□□□□□ -1.08
SNX13-201ENST00000409076 A0A087WXM4 84 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 K7EPI3 171 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 M0R129 80 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TNPO2O14787 897 aaKnown RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 STX7O15400 261 aaKnown RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 MTX2O75431 263 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ALDH1A2O94788 518 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 RBP1P09455 135 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ALPIP09923 528 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 PBLDP30039 288 aaPredicted RBP8.28□□□□□ -1.08
SNX13-201ENST00000409076 CHRNB3Q05901 458 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SELPLGQ14242 412 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 RAB39AQ14964 217 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CYP2A13Q16696 494 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SYT16Q17RD7 645 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SIRPB2Q5JXA9 342 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ANKS6Q68DC2 871 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 IQSEC1Q6DN90 963 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TBPL2Q6SJ96 375 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 MICU2Q8IYU8 434 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CARNMT1Q8N4J0 409 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 LRRC52Q8N7C0 313 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 OR52J3Q8NH60 311 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CNIH3Q8TBE1 160 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 GAB3Q8WWW8 586 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ASB9Q96DX5 294 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 VPS51Q9UID3 782 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 ADAM28Q9UKQ2 775 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 TRHDEQ9UKU6 1024 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 BAG5Q9UL15 447 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 CEPT1Q9Y6K0 416 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 NRXN2Q9P2S2 1712 aa8.28□□□□□ -1.08
SNX13-201ENST00000409076 SEC22BO75396 215 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms