RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 PTGIRP43119 386 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 FSTL1Q12841 308 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 TMEM44Q2T9K0 475 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 IQSEC1Q6DN90 963 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 PLPPR4Q7Z2D5 763 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 TOP6BLQ8N6T0 577 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 ZNF248Q8NDW4 579 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 LRTOMTQ8WZ04 291 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 KREMEN1Q96MU8 473 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 DUSP16Q9BY84 665 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 NUDT4Q9NZJ9 180 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 ZNF99A8MXY4 864 aaPredicted RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 BUD23O43709 281 aaKnown RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 GCATO75600 419 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 AP2A1O95782 977 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CLK3P49761 638 aaKnown RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 IDH3AP50213 366 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 LCLAT1Q6UWP7 414 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CERS6Q6ZMG9 384 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 AHSA2Q719I0 299 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 PARP8Q8N3A8 854 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 SPATA6LQ8N4H0 392 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 C11orf65Q8NCR3 313 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 OR5B17Q8NGF7 314 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 TRAPPC12Q8WVT3 735 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CSPG4P5Q96PW8 444 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 EBF2Q9HAK2 575 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 ZNHIT2Q9UHR6 403 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CEP152O94986 1710 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 CALCAP01258 141 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 IFNA6P05013 189 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 PKMP14618 531 aaKnown RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 SLC7A1P30825 629 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 CCR3P51677 355 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 VBP1P61758 197 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 MON1BQ7L1V2 547 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 TRIM74Q86UV6 250 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 TRIM73Q86UV7 250 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 FAM35AQ86V20 835 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 C4orf32Q8N8J7 132 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 GLB1L3Q8NCI6 653 aaPredicted RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 SDCBP2Q9H190 292 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 RAB23Q9ULC3 237 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 PCDHGB3Q9Y5G1 929 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 PSEN2P49810 448 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ARFIP1P53367 373 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 TPTEP56180 551 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 HUNKP57058 714 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ACSBG2Q5FVE4 666 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 RBM48Q5RL73 367 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 ZNF697Q5TEC3 545 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 PLD5Q8N7P1 536 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 VGLL2Q8N8G2 317 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 GPR156Q8NFN8 814 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 PGLYRP2Q96PD5 576 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 BCL2L14Q9BZR8 327 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.9□□□□□ -0.342e-6■■□□□ 14
RNF43-201ENST00000407977 SMURF2Q9HAU4 748 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.9□□□□□ -0.34
RNF43-201ENST00000407977 NRCAMQ92823 1304 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 JCADQ9P266 1359 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 EME2A4GXA9 379 aaPredicted RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 FAM172BPA6NC97 362 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 NOL4O94818 638 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 IFNW1P05000 195 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 LGALS2P05162 132 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 JAM2P57087 298 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 MYBPC3Q14896 1274 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 VPS26BQ4G0F5 336 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 CERCAMQ5T4B2 595 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 CHSY3Q70JA7 882 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 LRRC20Q8TCA0 184 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 TNFRSF25Q93038 417 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 TTYH3Q9C0H2 523 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 BRD9Q9H8M2 597 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 PAK6Q9NQU5 681 aaPredicted RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 CKLFQ9UBR5 152 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 AGO1Q9UL18 857 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 PMF1-BGLAPU3KQ54 211 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ERN1O75460 977 aaKnown RBP12.9□□□□□ -0.34
RNF43-201ENST00000407977 MC4RP32245 332 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ACADVLP49748 655 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 CAPSQ13938 189 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ZBED5Q49AG3 693 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 GCNT6Q5T4J0 391 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 GALNT5Q7Z7M9 940 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 TOP1MTQ969P6 601 aa12.9□□□□□ -0.34
RNF43-201ENST00000407977 ERMAPQ96PL5 475 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms