RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 FAM124BQ9H5Z6 455 aaPredicted RBP13.9□□□□□ -0.18
HMGA2-204ENST00000403681 EFCAB10A6NFE3 127 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 NRP1O14786 923 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 B3GAT3O94766 335 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 SERPINF2P08697 491 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 EEFSECP57772 596 aaKnown RBP13.9□□□□□ -0.19
HMGA2-204ENST00000403681 GRIK4Q16099 956 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 ZFP69Q49AA0 526 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 RBM20Q5T481 1227 aaKnown RBP13.9□□□□□ -0.19
HMGA2-204ENST00000403681 C9orf57Q5W0N0 161 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 MIB1Q86YT6 1006 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 FAR1Q8WVX9 515 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 MTERF3Q96E29 417 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 MINDY3Q9H8M7 445 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 ELP3Q9H9T3 547 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 ZFP14Q9HCL3 533 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 KLHL3Q9UH77 587 aa13.9□□□□□ -0.19
HMGA2-204ENST00000403681 BNIP3LO60238 219 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 IGFBP5P24593 272 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 S100A3P33764 101 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 ARSFP54793 590 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 IL2P60568 153 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 ZNF280DQ6N043 979 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 ZNF549Q6P9A3 640 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 SMG8Q8ND04 991 aaKnown RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 LRRC3Q9BY71 257 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 KAT8Q9H7Z6 458 aaKnown RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 PLOD2O00469 737 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 CPSF4O95639 269 aaKnown RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 SLC26A3P40879 764 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 ALDH3A2P51648 485 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 RPL38P63173 70 aaKnown RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 TWF1Q12792 350 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 KIAA0930Q6ICG6 404 aaPredicted RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 ZNF534Q76KX8 674 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 TMEM132CQ8N3T6 1108 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 TPD52L3Q96J77 140 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 SLC2A6Q9UGQ3 507 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 KRBA1A5PL33 1030 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 AREL1O15033 823 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 FGF10O15520 208 aaPredicted RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 LGALS2P05162 132 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 CDH1P12830 882 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 HOXD10P28358 340 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 CYP2C18P33260 490 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 HIPK1Q86Z02 1210 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 NKAPQ8N5F7 415 aaKnown RBP13.89□□□□□ -0.19
HMGA2-204ENST00000403681 SMARCD1Q96GM5 515 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 GPR63Q9BZJ6 419 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 MARCH7Q9H992 704 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 PIGVQ9NUD9 493 aa13.89□□□□□ -0.19
HMGA2-204ENST00000403681 HIST1H2AGP0C0S8 130 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 C7P10643 843 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 MBL2P11226 248 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 HIST1H2ADP20671 130 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 INCA1Q0VD86 236 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 INO80DQ53TQ3 878 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 SPPL2AQ8TCT8 520 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 HIST1H2AHQ96KK5 128 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 HBEGFQ99075 208 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 HIST1H2AJQ99878 128 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 H2AFJQ9BTM1 129 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 NAA50Q9GZZ1 169 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 EXD2Q9NVH0 621 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 ARMC1Q9NVT9 282 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 GDAP2Q9NXN4 497 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 DNAJB9Q9UBS3 223 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 VPS51Q9UID3 782 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 DUSP12Q9UNI6 340 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 FAM25AB3EWG3 89 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 FAM25CB3EWG5 89 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 FAM25GB3EWG6 89 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 TFECO14948 347 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 RGS14O43566 566 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 TSC22D2O75157 780 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 JUNP05412 331 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 DNAJB1P25685 340 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 DNAJB13P59910 316 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 CYP4F2P78329 520 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 PIGFQ07326 219 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 CYP4F3Q08477 520 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 PAFAH1B3Q15102 231 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 PTPRNQ16849 979 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 ZNF605Q86T29 641 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 IGFN1Q86VF2 1251 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 ABHD11Q8NFV4 315 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 SENP8Q96LD8 212 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 HNRNPABQ99729 332 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 POLE4Q9NR33 117 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 OLA1Q9NTK5 396 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 TMEM161AQ9NX61 479 aa13.88□□□□□ -0.19
HMGA2-204ENST00000403681 ZNF214Q9UL59 606 aaPredicted RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 SAMHD1Q9Y3Z3 626 aaKnown RBP13.88□□□□□ -0.19
HMGA2-204ENST00000403681 UGT2B11O75310 529 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms