RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 VWA5B2Q8N398 1253 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 LINC00116Q8NCU8 138 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 OR2T12Q8NG77 320 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 BIN3Q9NQY0 253 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 UBQLN1Q9UMX0 589 aaKnown RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 BCS1LQ9Y276 419 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 MED1Q15648 1581 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 LOC100130705A0A1B0GUX0 176 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 FGF3P11487 239 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 RPS3P23396 243 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 PCSK6P29122 969 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 ZNF143P52747 638 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CYP4F8P98187 520 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 SIX1Q15475 284 aaPredicted RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 KIZQ2M2Z5 673 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 SLC36A3Q495N2 470 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 COQ5Q5HYK3 327 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 DNAJB14Q8TBM8 379 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TRIT1Q9H3H1 467 aaKnown RBP9.94□□□□□ -0.82
PTPRM-203ENST00000400060 POU2F3Q9UKI9 436 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 TEX264Q9Y6I9 313 aa9.94□□□□□ -0.82
PTPRM-203ENST00000400060 AZIN1O14977 448 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ERN1O75460 977 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 IVDP26440 423 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ETV4P43268 484 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NKX2-5P52952 324 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 GTF2BQ00403 316 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 CDKL1Q00532 357 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PRKCEQ02156 737 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NPY5RQ15761 445 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ZSWIM7Q19AV6 140 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 GADL1Q6ZQY3 521 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 DGLUCYQ7Z3D6 616 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PHTF2Q8N3S3 785 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 FNDC5Q8NAU1 212 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 DPF3Q92784 378 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ZC3H10Q96K80 434 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 MXRA8Q9BRK3 442 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PELOQ9BRX2 385 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 COPS4Q9BT78 406 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 C1QTNF1Q9BXJ1 281 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 LHPPQ9H008 270 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SIK2Q9H0K1 926 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 KRCC1Q9NPI7 259 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 MAU2Q9Y6X3 613 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 CYP3A5P20815 502 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SOX11P35716 441 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 GNPDA1P46926 289 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 EMP3P54852 163 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 MAZP56270 477 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PCID2Q5JVF3 399 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 MPP7Q5T2T1 576 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 STRIP1Q5VSL9 837 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 LCN8Q6JVE9 175 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NAPRTQ6XQN6 538 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PRSS48Q7RTY5 328 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SLC43A3Q8NBI5 491 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ASB12Q8WXK4 309 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 REXO5Q96IC2 774 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 RGS14O43566 566 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 GMDSO60547 372 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ENTPD3O75355 529 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 RFPL3O75679 317 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PGK2P07205 417 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ERVK-10P10266 1014 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 CPOXP36551 454 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ARSFP54793 590 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 CRY1Q16526 586 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 C11orf88Q6PI97 169 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 RFPL4BQ6ZWI9 263 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 SLC37A3Q8NCC5 494 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 HAS1Q92839 578 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 TCEAL3Q969E4 200 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PPP3R2Q96LZ3 170 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 COL21A1Q96P44 957 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 EGFL8Q99944 293 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NT5C1AQ9BXI3 368 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 XPR1Q9UBH6 696 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 FARP1Q9Y4F1 1045 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 C4AP0C0L4 1744 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 C4BP0C0L5 1744 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 POLRMTO00411 1230 aaKnown RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 FAM155BO75949 473 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NDUFB10O96000 172 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 UQCRC1P31930 480 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 RGS4P49798 205 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 PLA2G16P53816 162 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ATP12AP54707 1039 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 FOXD4Q12950 439 aaPredicted RBP9.93□□□□□ -0.82
PTPRM-203ENST00000400060 IL18Q14116 193 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 COL28A1Q2UY09 1125 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 NANOGP8Q6NSW7 305 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 ZNF367Q7RTV3 350 aa9.93□□□□□ -0.82
PTPRM-203ENST00000400060 LGALS12Q96DT0 336 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms