RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SOX4Q06945 474 aaPredicted RBP17.01■□□□□ 0.31
PTPRA-205ENST00000399903 GRB7Q14451 532 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 RBM20Q5T481 1227 aaKnown RBP17.01■□□□□ 0.31
PTPRA-205ENST00000399903 KIAA0408Q6ZU52 694 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 USP43Q70EL4 1123 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 AQP12AQ8IXF9 295 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 KCNA7Q96RP8 456 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 ALG2Q9H553 416 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 C16orf96A6NNT2 1141 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 CLDN5O00501 218 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 AP2A1O95782 977 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 UGT2B4P06133 528 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 THAP5Q7Z6K1 395 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 LDB1Q86U70 411 aaPredicted RBP17.01■□□□□ 0.31
PTPRA-205ENST00000399903 ZBED2Q9BTP6 218 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 U3KQV3 271 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 ANK1P16157 1881 aa17.01■□□□□ 0.31
PTPRA-205ENST00000399903 KRT8P05787 483 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 HK2P52789 917 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 NCS1P62166 190 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 FAM45BPQ6NSW5 357 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 SLC26A9Q7LBE3 791 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 MFSD6LQ8IWD5 586 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 SYTL1Q8IYJ3 562 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 FAM45AQ8TCE6 357 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 C19orf60Q96EN9 201 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 SLC30A3Q99726 388 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 TUBA1CQ9BQE3 449 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 BDH2Q9BUT1 245 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 TRIT1Q9H3H1 467 aaKnown RBP17■□□□□ 0.31
PTPRA-205ENST00000399903 SLAMF8Q9P0V8 285 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 A8MT66 165 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 M0QYT0 321 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 DAB1O75553 588 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 MT-CYBP00156 380 aaPredicted RBP17■□□□□ 0.31
PTPRA-205ENST00000399903 TUFMP49411 452 aaKnown RBP17■□□□□ 0.31
PTPRA-205ENST00000399903 ATP6V0D1P61421 351 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 LINC00523Q86TU6 105 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 ARRDC4Q8NCT1 418 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 LRRC58Q96CX6 371 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 CGREF1Q99674 301 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 C6orf62Q9GZU0 229 aaPredicted RBP17■□□□□ 0.31
PTPRA-205ENST00000399903 TOR3AQ9H497 397 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 ACTR3BQ9P1U1 418 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 PDE10AQ9Y233 779 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 PCDHGA8Q9Y5G5 932 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 SNX10Q9Y5X0 201 aa17■□□□□ 0.31
PTPRA-205ENST00000399903 LRRC14BA6NHZ5 514 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 HACD1B0YJ81 288 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 RAD51BO15315 384 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 GPR32O75388 356 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 LRIG2O94898 1065 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 THRBP10828 461 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 TCF3P15923 654 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 PRKACGP22612 351 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 SLC6A2P23975 617 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MAP2K4P45985 399 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 FAM187BQ17R55 369 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 TMBIM1Q969X1 311 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MAGED4Q96JG8 741 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MAELQ96JY0 434 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 ALOXE3Q9BYJ1 711 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 GPN2Q9H9Y4 310 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 BOLA1Q9Y3E2 137 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 CCL22O00626 93 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 IDH3BO43837 385 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 NDUFS2O75306 463 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 CPNE6O95741 557 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 HGFP14210 728 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 TGM1P22735 817 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 PHC1P78364 1004 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 CAMK2BQ13554 666 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 PAN2Q504Q3 1202 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 CATSPEREQ5SY80 951 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 SPRED1Q7Z699 444 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 ARMC8Q8IUR7 673 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 PLD3Q8IV08 490 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 SLC22A17Q8WUG5 538 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 DMRTB1Q96MA1 342 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MRPL57Q9BQC6 102 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 NFKBIZQ9BYH8 718 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 NEK6Q9HC98 313 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 EIF2B3Q9NR50 452 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.99■□□□□ 0.314e-8■■■■□ 19.8
PTPRA-205ENST00000399903 DNMT3BQ9UBC3 853 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 SLCO3A1Q9UIG8 710 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 CITO14578 2027 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 LINC00854A0A1B0GVQ3 168 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 MYADML2A6NDP7 307 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 PMPCBO75439 489 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 IPO13O94829 963 aaKnown RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 SIX3O95343 332 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-205ENST00000399903 FCGR1AP12314 374 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 ITGB6P18564 788 aa16.99■□□□□ 0.31
PTPRA-205ENST00000399903 GTF2E2P29084 291 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms