RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 RAI2Q9Y5P3 530 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 ZFP37Q9Y6Q3 630 aaPredicted RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 GRIN2DO15399 1336 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 NID2Q14112 1375 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 NYNRINQ9P2P1 1898 aaKnown RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3DA0A087WVF3 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3IA0A087WXS9 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3EA0A087X179 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3KA0A087X1G2 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 IGKV6D-41A0A0C4DH26 115 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3FA6NER0 549 aaPredicted RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3LB9A6J9 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 CATP04040 527 aaKnown RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 FGF1P05230 155 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 BPGMP07738 259 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3HP0C7X1 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 VAV1P15498 845 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 AMD1P17707 334 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TALDO1P37837 337 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 GABRB2P47870 512 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 HSPA7P48741 367 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 EIF2B2P49770 351 aaKnown RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 ST13P50502 369 aaKnown RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 LPIN1Q14693 890 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 USP39Q53GS9 565 aaKnown RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 PAGE2BQ5JRK9 111 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 SNAP47Q5SQN1 464 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 HECTD2Q5U5R9 776 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 LYPLAL1Q5VWZ2 237 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 LPCAT4Q643R3 524 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3GQ6DHY5 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3CQ6IPX1 549 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 UBE2R2Q712K3 238 aaPredicted RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 HPS6Q86YV9 775 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 COLGALT2Q8IYK4 626 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TBC1D3Q8IZP1 549 aaPredicted RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 TOP6BLQ8N6T0 577 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 OR7D4Q8NG98 312 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 ASZ1Q8WWH4 475 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TRAPPC9Q96Q05 1148 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 SYT17Q9BSW7 474 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 CEP44Q9C0F1 390 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.25□□□□□ -1.89
KNL1-202ENST00000399668 TLE6Q9H808 572 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 GLOD4Q9HC38 313 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 ARL8BQ9NVJ2 186 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 KLHL28Q9NXS3 571 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 MAP10Q9P2G4 905 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 NOCTQ9UK39 431 aaKnown RBP3.25□□□□□ -1.89
KNL1-202ENST00000399668 QSER1Q2KHR3 1735 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TNCP24821 2201 aa3.25□□□□□ -1.89
KNL1-202ENST00000399668 TMEM88BA6NKF7 163 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 C2CD4BA6NLJ0 364 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SNTNA6NMZ2 147 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 KCNU1A8MYU2 1149 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SAP18O00422 153 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 SLC9A3R1O14745 358 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 ZW10O43264 779 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SLC28A2O43868 658 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NDUFS2O75306 463 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SLC22A3O75751 556 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CABYRO75952 493 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 MFN2O95140 757 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ZBTB11O95625 1053 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 OTCP00480 354 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 UGT2B4P06133 528 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 EFNA1P20827 205 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 TAS2R41P59536 307 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PDK3Q15120 406 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 RFX4Q33E94 735 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 GPR107Q5VW38 600 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CRTC3Q6UUV7 619 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SLC26A9Q7LBE3 791 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NKAPQ8N5F7 415 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 TERB1Q8NA31 727 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 C12orf50Q8NA57 414 aaPredicted RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 FAM156AQ8NDB6 213 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TSPAN14Q8NG11 270 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PCDH19Q8TAB3 1148 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ZNF398Q8TD17 642 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 HAPLN3Q96S86 360 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 RHOBTB2Q9BYZ6 727 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NUAK2Q9H093 628 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ALG2Q9H553 416 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SOHLH2Q9NX45 425 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 ADPRHL2Q9NX46 363 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NDUFA13Q9P0J0 144 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 SPATA2Q9UM82 520 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TPRKBQ9Y3C4 175 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 NOTCH4Q99466 2003 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 H0YC42 278 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TULP2O00295 520 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 KPNA5O15131 536 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 TPST2O60704 377 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 VNN1O95497 513 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 CNPP09543 421 aaKnown RBP3.24□□□□□ -1.89
KNL1-202ENST00000399668 IL1R2P27930 398 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PIK3R1P27986 724 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 GSTT1P30711 240 aa3.24□□□□□ -1.89
KNL1-202ENST00000399668 PTGIRP43119 386 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms