RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 NAIF1Q69YI7 327 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC29A4Q7RTT9 530 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 TMC8Q8IU68 726 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 SLC22A15Q8IZD6 547 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 OR4K17Q8NGC6 315 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PPP1R14BQ96C90 147 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PRICKLE1Q96MT3 831 aaPredicted RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 AARSD1Q9BTE6 412 aaKnown RBP10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 KLRF1Q9NZS2 232 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 CROTQ9UKG9 612 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 PTCH2Q9Y6C5 1203 aa10.93□□□□□ -0.66
CACNA1C-216ENST00000399638 MDM4O15151 490 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 HSF2Q03933 536 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 MBTD1Q05BQ5 628 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 C1orf94Q6P1W5 598 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 IKBIPQ70UQ0 350 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ITCHQ96J02 903 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SGK2Q9HBY8 427 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 MTRRQ9UBK8 725 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 CLCA3PQ9Y6N3 262 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 IFT172Q9UG01 1749 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ZNF726A6NNF4 738 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 E5RJQ4 531 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 CDK14O94921 469 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 C1RP00736 705 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 HEXBP07686 556 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 AHCYP23526 432 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 RAB39AQ14964 217 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SPANXN3Q5MJ09 141 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 DEF8Q6ZN54 512 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SPPL2BQ8TCT7 592 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ADAMTS15Q8TE58 950 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ASPNQ9BXN1 380 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SEMA3GQ9NS98 782 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 RBMX2Q9Y388 322 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 CAPN6Q9Y6Q1 641 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 A0A1W2PRU2 124 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 F8VZ95 297 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 TSPAN4O14817 238 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 TREHO43280 583 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 FGFR3P22607 806 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 TTPAP49638 278 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 TTMPQ5BVD1 217 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 UBE2R2Q712K3 238 aaPredicted RBP10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 IQCKQ8N0W5 287 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 OR2L3Q8NG85 312 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 FNDC11Q9BVV2 318 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 TFR2Q9UP52 801 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 DIP2CQ9Y2E4 1556 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 PTGES3LE9PB15 166 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SCGB1D2O95969 90 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 PRH1P02810 166 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 PRKCHP24723 683 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 S100A2P29034 98 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SMARCB1Q12824 385 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 HYAL2Q12891 473 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 GRTP1Q5TC63 336 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 THAP5Q7Z6K1 395 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 LRRC34Q8IZ02 419 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 TPCN2Q8NHX9 752 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 PPTC7Q8NI37 304 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 S100ZQ8WXG8 99 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 EXD2Q9NVH0 621 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 IKZF2Q9UKS7 526 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 PCDHGC5Q9Y5F6 944 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 WARSP23381 471 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 MC4RP32245 332 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ACTR1BP42025 376 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 ACTR1AP61163 376 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 FAM98BQ52LJ0 330 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 EIF3MQ7L2H7 374 aaKnown RBP10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 CITED4Q96RK1 184 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 SERINC1Q9NRX5 453 aa10.92□□□□□ -0.66
CACNA1C-216ENST00000399638 RRP8O43159 456 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 LINGO3P0C6S8 592 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ADH5P11766 374 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 MTHFRP42898 656 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 TOB1P50616 345 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 FGL2Q14314 439 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 LINGO4Q6UY18 593 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 KBTBD2Q8IY47 623 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 SIDT2Q8NBJ9 832 aaKnown RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 ATAD1Q8NBU5 361 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 BADQ92934 168 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 C12orf66Q96MD2 445 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 NAT9Q9BTE0 207 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 GPR88Q9GZN0 384 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 CPQQ9Y646 472 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 OR1F1O43749 312 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 C22orf31O95567 290 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 CCND3P30281 292 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 GRK5P34947 590 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 CLCN7P51798 805 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 AP2S1P53680 142 aaPredicted RBP10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 CDH11P55287 796 aa10.91□□□□□ -0.66
CACNA1C-216ENST00000399638 GRB10Q13322 594 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms