RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 DIABLOQ9NR28 239 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 GALPQ9UBC7 116 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 GTF2IRD1Q9UHL9 959 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 VPS28Q9UK41 221 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 UBR2Q8IWV8 1755 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 FOXD2O60548 495 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 BCAS2O75934 225 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LDLRP01130 860 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 DIO3P55073 304 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MLLT6P55198 1093 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LAPTM5Q13571 262 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 FRG1Q14331 258 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 NR6A1Q15406 480 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MAPK11Q15759 364 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 GLYATQ6IB77 296 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LRRC49Q8IUZ0 686 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 OFCC1Q8IZS5 231 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF483Q8TF39 744 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 FCGR1BQ92637 280 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ANAPC16Q96DE5 110 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SLC29A1Q99808 456 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 POLR1BQ9H9Y6 1135 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 USP22Q9UPT9 525 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SH3BGRLO75368 114 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 GSRP00390 522 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ANXA6P08133 673 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SPATA31D3P0C874 917 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PRKAR2AP13861 404 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SLC2A5P22732 501 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 GRIA2P42262 883 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 UFM1P61960 85 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TWF1Q12792 350 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SEMA3AQ14563 771 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KCTD11Q693B1 232 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SPATA31D4Q6ZUB0 917 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CROCCP3Q8IVE0 287 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 STAG3L4Q8TBR4 150 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 C3orf30Q96M34 536 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TM6SF2Q9BZW4 377 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KLQ9UEF7 1012 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 MOSPD1Q9UJG1 213 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 AGO1Q9UL18 857 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 DMTF1Q9Y222 760 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PCDHGA3Q9Y5H0 932 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KANSL1LA0AUZ9 987 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TUBAL3A6NHL2 446 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KPNA6O60684 536 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SEC22BO75396 215 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CDK14O94921 469 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CLIC3O95833 236 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 APLP1P51693 650 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 HK2P52789 917 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TRAF2Q12933 501 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PARP8Q8N3A8 854 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 CPSF7Q8N684 471 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 RASGEF1AQ8N9B8 481 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 KLHDC9Q8NEP7 349 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 OR2T34Q8NGX1 318 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 OR2T3Q8NH03 318 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ARRDC2Q8TBH0 407 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PGAP3Q96FM1 320 aaPredicted RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PAIP1Q9H074 479 aaKnown RBP4.91□□□□□ -1.62
SMAD4-202ENST00000398417 TNFRSF12AQ9NP84 129 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 LIMD1Q9UGP4 676 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 ZNHIT2Q9UHR6 403 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 PCDHB7Q9Y5E2 793 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 SSC5DA1L4H1 1573 aa4.91□□□□□ -1.62
SMAD4-202ENST00000398417 A0A1W2PQ67 120 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ENSAO43768 121 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 TBL1XO60907 577 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 TMCC1O94876 653 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ALOX15P16050 662 aaPredicted RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 DDX39BQ13838 428 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 PTPRRQ15256 657 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 OR4D1Q15615 310 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ATXN7L2Q5T6C5 722 aaPredicted RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 RNF19BQ6ZMZ0 732 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 EFL1Q7Z2Z2 1120 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 OSCP1Q8WVF1 389 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 GFM2Q969S9 779 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 PTERQ96BW5 349 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 FAM120BQ96EK7 910 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 C19orf60Q96EN9 201 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 FBXL20Q96IG2 436 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 TRMT13Q9NUP7 481 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 NCDNQ9UBB6 729 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 SLC38A8A6NNN8 435 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ECI2O75521 394 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 CHRNA1P02708 482 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ALBP02768 609 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 RPL10P27635 214 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ADRA1AP35348 466 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 AGTR2P50052 363 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 NDST2P52849 883 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 CCL23P55773 120 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 KCNA10Q16322 511 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 DEFB128Q7Z7B8 93 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 KBTBD6Q86V97 674 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms