RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 EFHBQ8N7U6 833 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 MBD3L1Q8WWY6 194 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 EXTL1Q92935 676 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-201ENST00000398179 SPACA1Q9HBV2 294 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 NMRK2Q9NPI5 230 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 STXBP5LQ9Y2K9 1186 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 PAPSS1O43252 624 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-201ENST00000398179 SCGB1D1O95968 90 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 HOXB8P17481 243 aaPredicted RBP12.77□□□□□ -0.37
CCBE1-201ENST00000398179 BDKRB2P30411 391 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 LMAN2Q12907 356 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 ARHGAP15Q53QZ3 475 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 LRRC38Q5VT99 294 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 BAIAP2L2Q6UXY1 529 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 MGME1Q9BQP7 344 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 BCO1Q9HAY6 547 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 DZANK1Q9NVP4 752 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 HRH3Q9Y5N1 445 aa12.77□□□□□ -0.37
CCBE1-201ENST00000398179 A0A1W2PPL8 197 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 MMP1P03956 469 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SFTPCP11686 197 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 GNG10P50151 68 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 CCR4P51679 360 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF155Q12901 538 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 FAM160B1Q5W0V3 765 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 XRRA1Q6P2D8 792 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 CRTC3Q6UUV7 619 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 MFSD9Q8NBP5 474 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 REEP2Q9BRK0 252 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 LRFN2Q9ULH4 789 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 HEY1Q9Y5J3 304 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 IRAK3Q9Y616 596 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SHMT1P34896 483 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 RFX3P48380 749 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ERVFC1P60507 584 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 NCOA4Q13772 614 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ANKRD22Q5VYY1 191 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 CAVIN3Q969G5 261 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SLC38A4Q969I6 547 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 C11orf24Q96F05 449 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF251Q9BRH9 671 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 TPT1P8Q9HAU6 139 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 NARFQ9UHQ1 456 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SLC13A4Q9UKG4 626 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 GDAQ9Y2T3 454 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ASB4Q9Y574 426 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 A0A1W2PP64 1363 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 TERTO14746 1132 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 CHST10O43529 356 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ZNF207O43670 478 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 VNN2O95498 520 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 CASP1P29466 404 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ARL4AP40617 200 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 MASP1P48740 699 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 MTF1Q14872 753 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 LSM12Q3MHD2 195 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 JAZF1Q86VZ6 243 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 EID3Q8N140 333 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 OR10T2Q8NGX3 314 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 DNAJB3Q8WWF6 145 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 HYLS1Q96M11 299 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 CCDC32Q9BV29 185 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SAMHD1Q9Y3Z3 626 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 AP4B1Q9Y6B7 739 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 FANCAO15360 1455 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 K7ERU9 68 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 PRPSAP2O60256 369 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 TCN1P20061 433 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 TNK2Q07912 1038 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 RAB11BQ15907 218 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SNAPC1Q16533 368 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 HEATR6Q6AI08 1181 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 UGT3A1Q6NUS8 523 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 ERN2Q76MJ5 926 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 DEDD2Q8WXF8 326 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 RTKNQ9BST9 563 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 DDX31Q9H8H2 851 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SOS2Q07890 1332 aaPredicted RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 RPS3P23396 243 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 SDC2P34741 201 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 MEOX2P50222 304 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 NAGLUP54802 743 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 GPSM2P81274 684 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 GBE1Q04446 702 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 NME3Q13232 169 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 PKN1Q16512 942 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 DUSP6Q16828 381 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 INTS11Q5TA45 600 aaKnown RBP12.76□□□□□ -0.37
CCBE1-201ENST00000398179 TTLL6Q8N841 843 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 DNAAF1Q8NEP3 725 aa12.76□□□□□ -0.37
CCBE1-201ENST00000398179 OR6S1Q8NH40 331 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms