RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 DENRO43583 198 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 SH3BGRLO75368 114 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 UROSP10746 265 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 MBL2P11226 248 aaPredicted RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 PKMP14618 531 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 PRKCQQ04759 706 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 QPRTQ15274 297 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 TSTD2Q5T7W7 516 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 PQLC3Q8N755 202 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 NRG4Q8WWG1 115 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 GPR22Q99680 433 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SLC25A51Q9H1U9 297 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 DPEP3Q9H4B8 488 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 GOLGA2P5Q9HBQ8 144 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 TRPC4Q9UBN4 977 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ZNF221Q9UK13 617 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 H7C4K7 107 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 IFRD1O00458 451 aaPredicted RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 MATN3O15232 486 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SLC7A4O43246 635 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 RPP40O75818 363 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 SCELO95171 688 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 MTHFD1P11586 935 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 ITGA2P17301 1181 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 TYMPP19971 482 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ACADVLP49748 655 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 HSPA14Q0VDF9 509 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SVOPLQ8N434 492 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SLC16A10Q8TF71 515 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 PHF10Q8WUB8 498 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 TMEM159Q96B96 161 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 HNRNPABQ99729 332 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 LRRC3Q9BY71 257 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ZNF696Q9H7X3 374 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 KAT8Q9H7Z6 458 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 USP29Q9HBJ7 922 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 MAPRE3Q9UPY8 281 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 MFHAS1Q9Y4C4 1052 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ARPC2O15144 300 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SERPINA1P01009 418 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ALDH4A1P30038 563 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ETV4P43268 484 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 CLCN2P51788 898 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 RPS7P62081 194 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 ELP6Q0PNE2 266 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SOWAHAQ2M3V2 549 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 FBXO48Q5FWF7 155 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 IQSEC1Q6DN90 963 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 CNSTQ6PJW8 725 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 AHSA2Q719I0 299 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 NELL1Q92832 810 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 LRRC58Q96CX6 371 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 Q96MT0 163 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 SMAD5Q99717 465 aaKnown RBP11.01□□□□□ -0.65
HPS4-202ENST00000398145 PCDH12Q9NPG4 1184 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 ACTR3BQ9P1U1 418 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 STYXL1Q9Y6J8 313 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 PTPRJQ12913 1337 aa11.01□□□□□ -0.65
HPS4-202ENST00000398145 MYOCOSA0A1B0GUC4 107 aa11□□□□□ -0.65
HPS4-202ENST00000398145 CCL22O00626 93 aa11□□□□□ -0.65
HPS4-202ENST00000398145 AIREO43918 545 aa11□□□□□ -0.65
HPS4-202ENST00000398145 WBP4O75554 376 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 IMPDH1P20839 514 aa11□□□□□ -0.65
HPS4-202ENST00000398145 SCNN1AP37088 669 aa11□□□□□ -0.65
HPS4-202ENST00000398145 OGFRL1Q5TC84 451 aaPredicted RBP11□□□□□ -0.65
HPS4-202ENST00000398145 HDDC2Q7Z4H3 204 aa11□□□□□ -0.65
HPS4-202ENST00000398145 DDX53Q86TM3 631 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 EPHX4Q8IUS5 362 aa11□□□□□ -0.65
HPS4-202ENST00000398145 MINDY2Q8NBR6 621 aa11□□□□□ -0.65
HPS4-202ENST00000398145 ZNF420Q8TAQ5 688 aaPredicted RBP11□□□□□ -0.65
HPS4-202ENST00000398145 PEBP4Q96S96 227 aa11□□□□□ -0.65
HPS4-202ENST00000398145 TSPAN18Q96SJ8 248 aa11□□□□□ -0.65
HPS4-202ENST00000398145 FEM1AQ9BSK4 669 aa11□□□□□ -0.65
HPS4-202ENST00000398145 BPIFA1Q9NP55 256 aa11□□□□□ -0.65
HPS4-202ENST00000398145 CNTN3Q9P232 1028 aa11□□□□□ -0.65
HPS4-202ENST00000398145 NENFQ9UMX5 172 aa11□□□□□ -0.65
HPS4-202ENST00000398145 SUV39H1O43463 412 aa11□□□□□ -0.65
HPS4-202ENST00000398145 CKMP06732 381 aa11□□□□□ -0.65
HPS4-202ENST00000398145 DHRS4L1P0CG22 281 aa11□□□□□ -0.65
HPS4-202ENST00000398145 NOVP48745 357 aa11□□□□□ -0.65
HPS4-202ENST00000398145 PSEN2P49810 448 aa11□□□□□ -0.65
HPS4-202ENST00000398145 EEFSECP57772 596 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 BNC1Q01954 994 aa11□□□□□ -0.65
HPS4-202ENST00000398145 BCL2L1Q07817 233 aa11□□□□□ -0.65
HPS4-202ENST00000398145 COX10Q12887 443 aa11□□□□□ -0.65
HPS4-202ENST00000398145 VGLL4Q14135 290 aa11□□□□□ -0.65
HPS4-202ENST00000398145 WDR36Q8NI36 951 aaKnown RBP11□□□□□ -0.65
HPS4-202ENST00000398145 EXOC2Q96KP1 924 aa11□□□□□ -0.65
HPS4-202ENST00000398145 TSSK3Q96PN8 268 aa11□□□□□ -0.65
HPS4-202ENST00000398145 AHSPQ9NZD4 102 aa11□□□□□ -0.65
HPS4-202ENST00000398145 PDP1Q9P0J1 537 aaPredicted RBP11□□□□□ -0.65
HPS4-202ENST00000398145 DNAJB9Q9UBS3 223 aa11□□□□□ -0.65
HPS4-202ENST00000398145 NPEPPSL1A6NEC2 478 aa11□□□□□ -0.65
HPS4-202ENST00000398145 A8MT66 165 aa11□□□□□ -0.65
HPS4-202ENST00000398145 ZNF99A8MXY4 864 aaPredicted RBP11□□□□□ -0.65
HPS4-202ENST00000398145 GRIN3BO60391 1043 aa11□□□□□ -0.65
HPS4-202ENST00000398145 AHSGP02765 367 aa11□□□□□ -0.65
HPS4-202ENST00000398145 BLVRAP53004 296 aa11□□□□□ -0.65
HPS4-202ENST00000398145 ADAM17P78536 824 aa11□□□□□ -0.65
HPS4-202ENST00000398145 STARD3Q14849 445 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms