RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 OLIG2Q13516 323 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 SIX1Q15475 284 aaPredicted RBP16.57■□□□□ 0.24
APTR-201ENST00000398043 OASLQ15646 514 aaKnown RBP16.57■□□□□ 0.24
APTR-201ENST00000398043 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 DOK6Q6PKX4 331 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 TAF8Q7Z7C8 310 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 SLC13A5Q86YT5 568 aaPredicted RBP16.57■□□□□ 0.24
APTR-201ENST00000398043 TRAM1L1Q8N609 369 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 FAM71DQ8N9W8 422 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 DTX3LQ8TDB6 740 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 ATG4AQ8WYN0 398 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 GLMNQ92990 594 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 NAT6Q93015 286 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 RTP4Q96DX8 246 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 PLEKHG4BQ96PX9 1271 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 FERMT1Q9BQL6 677 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 TMEM121Q9BTD3 319 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 ZSCAN5AQ9BUG6 496 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 CARD9Q9H257 536 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 RAD18Q9NS91 495 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 HACD3Q9P035 362 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 IL17CQ9P0M4 197 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 SIRPGQ9P1W8 387 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 DKK4Q9UBT3 224 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 RABGEF1Q9UJ41 708 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 MOSPD1Q9UJG1 213 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 DOLKQ9UPQ8 538 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 PLEKHM1Q9Y4G2 1056 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 ZZEF1O43149 2961 aa16.57■□□□□ 0.24
APTR-201ENST00000398043 TRABD2BA6NFA1 517 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 GAPDHSO14556 408 aaPredicted RBP16.56■□□□□ 0.24
APTR-201ENST00000398043 STK10O94804 968 aaKnown RBP16.56■□□□□ 0.24
APTR-201ENST00000398043 MT-CO3P00414 261 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 JUPP14923 745 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 AK4P27144 223 aaPredicted RBP16.56■□□□□ 0.24
APTR-201ENST00000398043 HLTFQ14527 1009 aaKnown RBP eCLIP16.56■□□□□ 0.24
APTR-201ENST00000398043 RPS6KA1Q15418 735 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 ALS2CLQ60I27 953 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 PDPK2PQ6A1A2 396 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 FAM46DQ8NEK8 389 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 OR2M4Q96R27 311 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 FICDQ9BVA6 458 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 SPATA16Q9BXB7 569 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 GSDMCQ9BYG8 508 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 ARNT2Q9HBZ2 717 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 TAAR2Q9P1P5 351 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 GULP1Q9UBP9 304 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 CLCA2Q9UQC9 943 aa16.56■□□□□ 0.24
APTR-201ENST00000398043 AAR2Q9Y312 384 aaKnown RBP16.56■□□□□ 0.24
APTR-201ENST00000398043 TAF4O00268 1085 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 NTN3O00634 580 aaPredicted RBP16.55■□□□□ 0.24
APTR-201ENST00000398043 LIASO43766 372 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 METTL18O95568 372 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 ILF3Q12906 894 aaKnown RBP eCLIP16.55■□□□□ 0.24
APTR-201ENST00000398043 PARP6Q2NL67 630 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 SEL1L2Q5TEA6 688 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
APTR-201ENST00000398043 TRIM58Q8NG06 486 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 MAPK15Q8TD08 544 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 GLYATL1Q969I3 302 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 VPS35Q96QK1 796 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 FSD1LQ9BXM9 530 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 KCNF1Q9H3M0 494 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 RMI1Q9H9A7 625 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 BPIFA1Q9NP55 256 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 IL26Q9NPH9 171 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 ATXN10Q9UBB4 475 aa16.55■□□□□ 0.24
APTR-201ENST00000398043 CHUKO15111 745 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 NUAK1O60285 661 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 SLC4A1P02730 911 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 CA5AP35218 305 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 PRPSAP1Q14558 356 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 RTP5Q14D33 572 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 ST3GAL2Q16842 350 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 KHDC1Q4VXA5 237 aaKnown RBP16.54■□□□□ 0.24
APTR-201ENST00000398043 C14orf28Q4W4Y0 310 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 ZNF569Q5MCW4 686 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 CERCAMQ5T4B2 595 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 ZNF648Q5T619 568 aaPredicted RBP16.54■□□□□ 0.24
APTR-201ENST00000398043 MARK2Q7KZI7 788 aaKnown RBP16.54■□□□□ 0.24
APTR-201ENST00000398043 GLT6D1Q7Z4J2 308 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 ADGRG6Q86SQ4 1221 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 NAGSQ8N159 534 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 BLOC1S5Q8TDH9 187 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 CCDC74AQ96AQ1 378 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 PPP1R2P1Q96PQ5 205 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 ALS2CR12Q96Q35 445 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 APOL2Q9BQE5 337 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 CCDC3Q9BQI4 270 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 FRMD8P1Q9BZ68 369 aaPredicted RBP16.54■□□□□ 0.24
APTR-201ENST00000398043 NRSN2Q9GZP1 204 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 SUDS3Q9H7L9 328 aaPredicted RBP16.54■□□□□ 0.24
APTR-201ENST00000398043 TRIM39Q9HCM9 518 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 APPL1Q9UKG1 709 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 ZMIZ1Q9ULJ6 1067 aa16.54■□□□□ 0.24
APTR-201ENST00000398043 PKD1L2Q7Z442 2459 aa16.53■□□□□ 0.24
APTR-201ENST00000398043 A0A1W2PQM1 296 aa16.53■□□□□ 0.24
APTR-201ENST00000398043 PRR19A6NJB7 356 aa16.53■□□□□ 0.24
APTR-201ENST00000398043 USP12O75317 370 aa16.53■□□□□ 0.24
APTR-201ENST00000398043 ASMTLO95671 621 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms