RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TTMPQ5BVD1 217 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 ZDHHC20Q5W0Z9 365 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 FAM151BQ6UXP7 276 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 KIAA0408Q6ZU52 694 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 Q6ZVL8 140 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 GALNT7Q86SF2 657 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 GABPB2Q8TAK5 448 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 MZB1Q8WU39 189 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 PKNOX2Q96KN3 472 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 RBBP8Q99708 897 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 SEMA4GQ9NTN9 838 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 EBF1Q9UH73 591 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 TBK1Q9UHD2 729 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 GMEB2Q9UKD1 530 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 FZD4Q9ULV1 537 aa16.85■□□□□ 0.29
TSPAN4-205ENST00000397406 GLYATL1P3A0A0U1RQE8 302 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 MED19A0JLT2 244 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 HMX2A2RU54 273 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 RGSL1A5PLK6 1076 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 NEMP1O14524 444 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 AXIN1O15169 862 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 RGS16O15492 202 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 TSPAN6O43657 245 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 PLRG1O43660 514 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 GDF9O60383 454 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 PRAMEF1O95521 474 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 AHSGP02765 367 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 C6P13671 934 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 ETV3P41162 512 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CDKN1CP49918 316 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 SERPINB9P50453 376 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CACNG1Q06432 222 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CHRNA6Q15825 494 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CCDC6Q16204 474 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 TYSND1Q2T9J0 566 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 FASTKD1Q53R41 847 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 ZNF789Q5FWF6 425 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 GRTP1Q5TC63 336 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 MRNIPQ6NTE8 343 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 PSAPL1Q6NUJ1 521 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 KIAA1324Q6UXG2 1013 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 PIANPQ8IYJ0 282 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 PNPLA1Q8N8W4 532 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CXorf40AQ8TE69 158 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 SCG3Q8WXD2 468 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CENPHQ9H3R5 247 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 MED4Q9NPJ6 270 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 RXFP3Q9NSD7 469 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 FAM53CQ9NYF3 392 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 CD84Q9UIB8 345 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 INVSQ9Y283 1065 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 COQ6Q9Y2Z9 468 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 SLC30A1Q9Y6M5 507 aa16.84■□□□□ 0.29
TSPAN4-205ENST00000397406 EML5Q05BV3 1969 aa16.83■□□□□ 0.29
TSPAN4-205ENST00000397406 TRBV5-4A0A0C4DH59 114 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 GOLGA8CPA6NN73 597 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 AGAP14A8MT82 685 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 H3BQF6 201 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 GPR39O43194 453 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 MMP20O60882 483 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 S1PR4O95977 384 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 ACADMP11310 421 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 CA5AP35218 305 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 LEPRP48357 1165 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 ADPRHP54922 357 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 NFATC2Q13469 925 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 ACOX1Q15067 660 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 PLK5Q496M5 336 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 ZRANB3Q5FWF4 1079 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 HENMT1Q5T8I9 393 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 AGBL2Q5U5Z8 902 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 CEP68Q76N32 757 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 CYP2U1Q7Z449 544 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 SNX20Q7Z614 316 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 LDB1Q86U70 411 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 ZC3HC1Q86WB0 502 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 NRSN1Q8IZ57 195 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 OTUD6BQ8N6M0 293 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 GOLGA6L1Q8N7Z2 621 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 DTX3LQ8TDB6 740 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 GANCQ8TET4 914 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 HMGB4Q8WW32 186 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 TLCD1Q96CP7 247 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 DTD2Q96FN9 168 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 CDH19Q9H159 772 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 DUSP15Q9H1R2 295 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 ABCG8Q9H221 673 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 FAM96AQ9H5X1 160 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 CD93Q9NPY3 652 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 FBXO6Q9NRD1 293 aaPredicted RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 RAD18Q9NS91 495 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 USP36Q9P275 1121 aaKnown RBP16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 TXNDC16Q9P2K2 825 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 RAB23Q9ULC3 237 aa16.83■□□□□ 0.28
TSPAN4-205ENST00000397406 IQANK1A0A1B0GTG1 560 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 FOXO6A8MYZ6 492 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 WNT9AO14904 365 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 HAUS5O94927 633 aa16.82■□□□□ 0.28
TSPAN4-205ENST00000397406 APBB3O95704 486 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms