RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 COMMD8Q9NX08 183 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 TSR3Q9UJK0 312 aaKnown RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 RNF112Q9ULX5 631 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 BTRCQ9Y297 605 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 RAI2Q9Y5P3 530 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 PFDN1O60925 122 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 ALDOCP09972 364 aaKnown RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 CDK4P11802 303 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 TUFMP49411 452 aaKnown RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 ECT2LQ008S8 904 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 GALNT1Q10472 559 aaPredicted RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 TSNQ15631 228 aaKnown RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 PTPRNQ16849 979 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 C5orf22Q49AR2 442 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 PSAPL1Q6NUJ1 521 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 RAB44Q7Z6P3 723 aaPredicted RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 CLYBLQ8N0X4 340 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 PXYLP1Q8TE99 480 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 C2orf15Q8WU43 125 aaKnown RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 STON2Q8WXE9 905 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 ESAMQ96AP7 390 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 LRGUKQ96M69 825 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 TRMOQ9BU70 441 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 VN1R3Q9BXE9 311 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 TDRD1Q9BXT4 1180 aaKnown RBP23.65■■□□□ 1.38
PABPN1-202ENST00000397276 FKBPLQ9UIM3 349 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 MED16Q9Y2X0 877 aa23.65■■□□□ 1.38
PABPN1-202ENST00000397276 C2orf81A6NN90 581 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 CDC7O00311 574 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 HMGA1P17096 107 aaKnown RBP23.64■■□□□ 1.38
PABPN1-202ENST00000397276 NELFEP18615 380 aaKnown RBP23.64■■□□□ 1.38
PABPN1-202ENST00000397276 USP41Q3LFD5 358 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 UGT3A2Q3SY77 523 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 SETMARQ53H47 684 aaPredicted RBP23.64■■□□□ 1.38
PABPN1-202ENST00000397276 ALG1LQ6GMV1 187 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 SLC8B1Q6J4K2 584 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.64■■□□□ 1.381e-8■■■■□ 26.3
PABPN1-202ENST00000397276 AMIGO2Q86SJ2 522 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 SLC45A3Q96JT2 553 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 ATOH8Q96SQ7 321 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 MRPL9Q9BYD2 267 aaKnown RBP23.64■■□□□ 1.38
PABPN1-202ENST00000397276 TAS2R13Q9NYV9 303 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 NDUFA13Q9P0J0 144 aa23.64■■□□□ 1.38
PABPN1-202ENST00000397276 PIP5K1BO14986 540 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 CLASP2O75122 1294 aaKnown RBP23.64■■□□□ 1.37
PABPN1-202ENST00000397276 SNRPB2P08579 225 aaKnown RBP23.64■■□□□ 1.37
PABPN1-202ENST00000397276 OGNP20774 298 aaKnown RBP23.64■■□□□ 1.37
PABPN1-202ENST00000397276 CRIPAKQ8N1N5 446 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 PEX13Q92968 403 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 PKP2Q99959 881 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 IL1RL2Q9HB29 575 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 TRPM5Q9NZQ8 1165 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 VPS28Q9UK41 221 aa23.64■■□□□ 1.37
PABPN1-202ENST00000397276 EEF1DP29692 281 aaKnown RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 SLC5A2P31639 672 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 ZRANB3Q5FWF4 1079 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 PITRM1Q5JRX3 1037 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TMCO2Q7Z6W1 182 aaPredicted RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 LPGAT1Q92604 370 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 CDK5RAP1Q96SZ6 601 aaKnown RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 CLSTN3Q9BQT9 956 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 SARS2Q9NP81 518 aaKnown RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 MTRRQ9UBK8 725 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 MAGEB3O15480 346 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 C1RP00736 705 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 LINC00032P0C843 101 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 CR2P20023 1033 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TWF1Q12792 350 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 LRP8Q14114 963 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 BTG3Q14201 252 aaPredicted RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TYSND1Q2T9J0 566 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 CARNMT1Q8N4J0 409 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 LIN28AQ9H9Z2 209 aaKnown RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 RIMS3Q9UJD0 308 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 A0A0J9YVX5 310 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 ACOT8O14734 319 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 NIPSNAP2O75323 286 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 MC4RP32245 332 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 GALK1P51570 392 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 ARF5P84085 180 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 GRB7Q14451 532 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 RFTN1Q14699 578 aaPredicted RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TAF1AQ15573 450 aaPredicted RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TRIM74Q86UV6 250 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TRIM73Q86UV7 250 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 GRIN3AQ8TCU5 1115 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TWIST2Q8WVJ9 160 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TMEM175Q9BSA9 504 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 C6orf203Q9P0P8 240 aaPredicted RBP23.63■■□□□ 1.37
PABPN1-202ENST00000397276 TIMM22Q9Y584 194 aa23.63■■□□□ 1.37
PABPN1-202ENST00000397276 MRASO14807 208 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 BCAS2O75934 225 aaPredicted RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 MZF1P28698 734 aaPredicted RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 SUOXP51687 545 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 NFKB2Q00653 900 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 SPOUT1Q5T280 376 aaKnown RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 ADGRF1Q5T601 910 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 FAM117BQ6P1L5 589 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 AFTPHQ6ULP2 937 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 LRRC43Q8N309 656 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms