RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 USP1O94782 785 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 CER1O95813 267 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 PAMP19021 973 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 TGM1P22735 817 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 MC4RP32245 332 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 ARSDP51689 593 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 IRX4P78413 519 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 TMPRSS15P98073 1019 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 DHX9Q08211 1270 aaKnown RBP16.3■□□□□ 0.2
AP1S3-202ENST00000396653 NFATC2Q13469 925 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 CCDC6Q16204 474 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 ZNF423Q2M1K9 1284 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 GPR33Q49SQ1 333 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 ATP13A5Q4VNC0 1218 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 KIAA0930Q6ICG6 404 aaPredicted RBP16.3■□□□□ 0.2
AP1S3-202ENST00000396653 CASC4Q6P4E1 433 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 ZDHHC24Q6UX98 284 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 SNX20Q7Z614 316 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 TMEM135Q86UB9 458 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 CCNJLQ8IV13 435 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 AGGF1Q8N302 714 aaeCLIP16.3■□□□□ 0.2
AP1S3-202ENST00000396653 ZNF398Q8TD17 642 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 BTN2A2Q8WVV5 523 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 STAMBPL1Q96FJ0 436 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 TBATAQ96M53 351 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 ZNF778Q96MU6 729 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 SMOC1Q9H4F8 434 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 VPS18Q9P253 973 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 CNOT6Q9ULM6 557 aaKnown RBP16.3■□□□□ 0.2
AP1S3-202ENST00000396653 SNX11Q9Y5W9 270 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 SLC30A1Q9Y6M5 507 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 DMDP11532 3685 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 MYO15AQ9UKN7 3530 aa16.3■□□□□ 0.2
AP1S3-202ENST00000396653 TRBV5-4A0A0C4DH59 114 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 ESYT3A0FGR9 886 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 LNP1A1A4G5 178 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 CCDC78A2IDD5 438 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 SLU7O95391 586 aaKnown RBP16.29■□□□□ 0.2
AP1S3-202ENST00000396653 TTC4O95801 387 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 ENGP17813 658 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 PGAM1P18669 254 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 NMBRP28336 390 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 FOXN2P32314 431 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 PLTPP55058 493 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 PRAMEP78395 509 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 CACNG1Q06432 222 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 FZD2Q14332 565 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 BBS9Q3SYG4 887 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 LDLRAP1Q5SW96 308 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 TPRG1LQ5T0D9 272 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 TCEAL6Q6IPX3 200 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 PRR23CQ6ZRP0 262 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 CENPUQ71F23 418 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 LRRN4CLQ8ND94 238 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 DDHD1Q8NEL9 900 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 OR56A4Q8NGH8 313 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 FBXO25Q8TCJ0 367 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 TCEAL3Q969E4 200 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 MFSD3Q96ES6 412 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
AP1S3-202ENST00000396653 EBNA1BP2Q99848 306 aaKnown RBP16.29■□□□□ 0.2
AP1S3-202ENST00000396653 LGR4Q9BXB1 951 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 ASB8Q9H765 288 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 ZDHHC18Q9NUE0 388 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 SLC2A6Q9UGQ3 507 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 SLC17A4Q9Y2C5 497 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 FNDC3AQ9Y2H6 1198 aaKnown RBP16.29■□□□□ 0.2
AP1S3-202ENST00000396653 MAD1L1Q9Y6D9 718 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 TEX264Q9Y6I9 313 aa16.29■□□□□ 0.2
AP1S3-202ENST00000396653 CCDC162PA2VCL2 907 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 GPR89AB7ZAQ6 455 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 INPP4BO15327 924 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 GFRA3O60609 400 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 SLC25A14O95258 325 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 IVLP07476 585 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 GPR89BP0CG08 455 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 NME1P15531 152 aaKnown RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 RXRGP48443 463 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 BLKP51451 505 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 EIF2B5Q13144 721 aaKnown RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 CUL1Q13616 776 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 TRADDQ15628 312 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 ANKRD20A4Q4UJ75 823 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 CEP128Q6ZU80 1094 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 DCLK2Q8N568 766 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 HEXDCQ8WVB3 486 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 HDAC10Q969S8 669 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 ZNF669Q96BR6 464 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 SCARF2Q96GP6 870 aaPredicted RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 ZCCHC2Q9C0B9 1178 aaKnown RBP16.28■□□□□ 0.2
AP1S3-202ENST00000396653 RMI1Q9H9A7 625 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 TRIM39Q9HCM9 518 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 KLQ9UEF7 1012 aa16.28■□□□□ 0.2
AP1S3-202ENST00000396653 CRLS1Q9UJA2 301 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms