RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 GBX1Q14549 363 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 SMU1Q2TAY7 513 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 TRIM60Q495X7 471 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZDHHC20Q5W0Z9 365 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZFP1Q6P2D0 407 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 CRLF3Q8IUI8 442 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ATPAF2Q8N5M1 289 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 TET1Q8NFU7 2136 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 EME1Q96AY2 570 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 TRIM43Q96BQ3 446 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 EFHD2Q96C19 240 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 TIFAQ96CG3 184 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ACSF2Q96CM8 615 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 ISOC1Q96CN7 298 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 L3HYPDHQ96EM0 354 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 PLEKHA8Q96JA3 519 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZNF778Q96MU6 729 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 GPATCH1Q9BRR8 931 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 UNKQ9C0B0 810 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 TPK1Q9H3S4 243 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 ZNF395Q9H8N7 513 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 SMOXQ9NWM0 555 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 SCHIP1Q9P0W5 487 aaPredicted RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 LRFN2Q9ULH4 789 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 MRPS23Q9Y3D9 190 aaKnown RBP5.35□□□□□ -1.55
VPS41-203ENST00000395969 YIPF1Q9Y548 306 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 INSL5Q9Y5Q6 135 aa5.35□□□□□ -1.55
VPS41-203ENST00000395969 PRSS51A0A1B0GVH4 220 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CXorf49A8MYA2 514 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 SLCO1B7G3V0H7 640 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 H3BNH8 94 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 LDB2O43679 373 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 PLIN3O60664 434 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 SEC24AO95486 1093 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 HLA-DQB2P05538 268 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 PTPN2P17706 415 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CDH3P22223 829 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 GABRB3P28472 473 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 SPRP35270 261 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 SLC11A2P49281 568 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ATP4BP51164 291 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 NEK2P51955 445 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 DCDC1P59894 354 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 AP1S1P61966 158 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TMPRSS15P98073 1019 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ATP1A4Q13733 1029 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 HERC3Q15034 1050 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TCHHL1Q5QJ38 904 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 CARM1Q86X55 608 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 DEFB107AQ8IZN7 70 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ABI1Q8IZP0 508 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 LILRA2Q8N149 483 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 PGBD5Q8N414 524 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 FIBINQ8TAL6 211 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TBC1D15Q8TC07 691 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 STYXQ8WUJ0 223 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 FBXO32Q969P5 355 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ACDQ96AP0 544 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CCDC126Q96EE4 140 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CDCA3Q99618 268 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 OSBPL10Q9BXB5 764 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TDRD1Q9BXT4 1180 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 MAGEE1Q9HCI5 957 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 AASDHPPTQ9NRN7 309 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 SYBUQ9NX95 663 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 NCKIPSDQ9NZQ3 722 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 GNPTGQ9UJJ9 305 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 VPS9D1Q9Y2B5 631 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 COPEO14579 308 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 COCHO43405 550 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TSPAN6O43657 245 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CLASP2O75122 1294 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 GJB5O95377 273 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 GSTM1P09488 218 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 KITP10721 976 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ACPPP15309 386 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ZNF26P17031 533 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 PSMC3P17980 439 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 PAMP19021 973 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 RCVRNP35243 200 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 OR1G1P47890 313 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 EIF2B2P49770 351 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 BASP1P80723 227 aaKnown RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 TLE2Q04725 743 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TAF10Q12962 218 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 STX3Q13277 289 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 MTM1Q13496 603 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TAF1AQ15573 450 aaPredicted RBP5.34□□□□□ -1.55
VPS41-203ENST00000395969 CHI3L2Q15782 390 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 INAQ16352 499 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 CDO1Q16878 200 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 LRRC26Q2I0M4 334 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 TSTD2Q5T7W7 516 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 IL23RQ5VWK5 629 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 LYPLAL1Q5VWZ2 237 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 IL31Q6EBC2 164 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ALKBH2Q6NS38 261 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 SCYL2Q6P3W7 929 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 NCEH1Q6PIU2 408 aa5.34□□□□□ -1.55
VPS41-203ENST00000395969 ZYG11AQ6WRX3 759 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms