RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TBC1D3GQ6DHY5 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3CQ6IPX1 549 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TMPRSS11AQ6ZMR5 421 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TBC1D3Q8IZP1 549 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MECRQ9BV79 373 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 C1QTNF1Q9BXJ1 281 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PRRG4Q9BZD6 226 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ST6GALNAC4Q9H4F1 302 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 GLOD4Q9HC38 313 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RAPGEFL1Q9UHV5 662 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HBS1LQ9Y450 684 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 AK5Q9Y6K8 562 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 COMMD3-BMI1R4GMX3 469 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PAPSS1O43252 624 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 NDST3O95803 873 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HNRNPLP14866 589 aaKnown RBP eCLIP5.43□□□□□ -1.543e-7■■■■□ 23.3
VPS13C-204ENST00000395898 RHOQP17081 205 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MTHFRP42898 656 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CBX5P45973 191 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SMCO1Q147U7 214 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TEAD4Q15561 434 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MON1BQ7L1V2 547 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 XYLT1Q86Y38 959 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HIPK1Q86Z02 1210 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HM13Q8TCT9 377 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RAD51AP1Q96B01 352 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TCF12Q99081 682 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 GPR20Q99678 358 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 GMIPQ9P107 970 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MAFBQ9Y5Q3 323 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ABHD14A-ACY1A0A1B0GW23 586 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 XKRYO14609 159 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SSNA1O43805 119 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 WFS1O76024 890 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SNHG28P0DPA3 235 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TM4SF1P30408 202 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 NSG1P42857 185 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SSR2P43308 183 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 KIR3DL1P43629 444 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RALGDSQ12967 914 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SLC30A8Q8IWU4 369 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CPSF7Q8N684 471 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 BRSK1Q8TDC3 778 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 DNAJC5Q9H3Z4 198 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MCUBQ9NWR8 336 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 DMTF1Q9Y222 760 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 LRCH4O75427 683 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SERPINA1P01009 418 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ASLP04424 464 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PKMP14618 531 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CTPS1P17812 591 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ITPKBP27987 946 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ICAM3P32942 547 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ADRA1BP35368 520 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SLC5A3P53794 718 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PYDC2Q56P42 97 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CCNYL2Q5T2Q4 361 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF730Q6ZMV8 503 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PQLC1Q8N2U9 271 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 UBR7Q8N806 425 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 DNAJB8Q8NHS0 232 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SPOCK2Q92563 424 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF354BQ96LW1 612 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HAPLN3Q96S86 360 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MAGEH1Q9H213 219 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TIMMDC1Q9NPL8 285 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 IMP3Q9NV31 184 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 UBAP1Q9NZ09 502 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MTRRQ9UBK8 725 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 OGDHLQ9ULD0 1010 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SNX7Q9UNH6 387 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PTPRJQ12913 1337 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 FADS2P1A8MWK0 482 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MATN3O15232 486 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 L1CAMP32004 1257 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 GLUD2P49448 558 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TAF10Q12962 218 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ZIK1Q3SY52 487 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 INTS6LQ5JSJ4 861 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ATXN7L2Q5T6C5 722 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 BTN2A1Q7KYR7 527 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 DAW1Q8N136 415 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ADAMTS15Q8TE58 950 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PHF11Q9UIL8 331 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 STXBP5LQ9Y2K9 1186 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 B4GALT5O43286 388 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TULP3O75386 442 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 C2P06681 752 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TSPAN8P19075 237 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CMPK1P30085 196 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 GSTT1P30711 240 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RAB2AP61019 212 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 USP4Q13107 963 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RFTN1Q14699 578 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ECM1Q16610 540 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TREML2Q5T2D2 321 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PIK3R6Q5UE93 754 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SLAIN1Q8ND83 568 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SLC22A17Q8WUG5 538 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms