RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 IGLV3-25P01717 112 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SNRPD1P62314 119 aaKnown RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 MBOAT1Q6ZNC8 495 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SMG7Q92540 1137 aaKnown RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 NCLNQ969V3 563 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 FEM1CQ96JP0 617 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 C15orf41Q9Y2V0 281 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SNX13Q9Y5W8 968 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 H3BMM5 538 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 PLK4O00444 970 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 OR4F21O95013 312 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 GM2AP17900 193 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 EFNA1P20827 205 aaPredicted RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 TTPAP49638 278 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 IHHQ14623 411 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 CYTH1Q15438 398 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 CHRNA6Q15825 494 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 VPS33AQ96AX1 596 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 PLD4Q96BZ4 506 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 ACAT2Q9BWD1 397 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 DYRK4Q9NR20 520 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 TRIM43BA6NCK2 446 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 PRMT5O14744 637 aaPredicted RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 MRASO14807 208 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 PIP5K1BO14986 540 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 KDELR3O43731 214 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 VNN2O95498 520 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 C1QAP02745 245 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SERPIND1P05546 499 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 NELFEP18615 380 aaKnown RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 ITPKAP23677 461 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 ARCN1P48444 511 aaKnown RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 ARF5P84085 180 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SH2D5Q6ZV89 423 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SZRD1Q7Z422 152 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 BEND7Q8N7W2 519 aaPredicted RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 TRIM43Q96BQ3 446 aaPredicted RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 PTERQ96BW5 349 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 HHIPL1Q96JK4 782 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 SLC46A2Q9BY10 475 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 YIPF3Q9GZM5 350 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 EBF3Q9H4W6 596 aa15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 KIAA1522Q9P206 1035 aaPredicted RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 PNMA8BQ9ULN7 279 aaPredicted RBP15.81■□□□□ 0.12
SMARCD1-202ENST00000394963 TBX10O75333 385 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 PSMC3P17980 439 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 LAMB3Q13751 1172 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 STARD3Q14849 445 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 PLA2G4EQ3MJ16 856 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 CHST9Q7L1S5 443 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 TRIM74Q86UV6 250 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 BHLHE22Q8NFJ8 381 aaPredicted RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 SEPHS2Q99611 448 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 DRC3Q9H069 523 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 NOL11Q9H8H0 719 aaKnown RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 DLGAP2Q9P1A6 1054 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 MAP1BP46821 2468 aaKnown RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 LRATO95237 230 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 HALP42357 657 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 NRF1Q16656 503 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 FNDC3BQ53EP0 1204 aaKnown RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 TPGS2Q68CL5 300 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 DPY19L3Q6ZPD9 716 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 SLC22A9Q8IVM8 553 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 ZNF276Q8N554 614 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 KLK6Q92876 244 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 CCDC126Q96EE4 140 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 NAF1Q96HR8 494 aaKnown RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 ZNF711Q9Y462 761 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 GLYATL1P3A0A0U1RQE8 302 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 HNRNPCL1O60812 293 aaKnown RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 DNAJA2O60884 412 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 IRS1P35568 1242 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 CCNHP51946 323 aaPredicted RBP15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 CCNG1P51959 295 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 PRMT2P55345 433 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 RING1Q06587 406 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 TMTC4Q5T4D3 741 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 LRRC74BQ6ZQY2 392 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 CWH43Q9H720 699 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 LMCD1Q9NZU5 365 aa15.8■□□□□ 0.12
SMARCD1-202ENST00000394963 UPK3BL1B0FP48 263 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 UPK3BL2E5RIL1 263 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 AZIN1O14977 448 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TYRP14679 529 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TPD52P55327 224 aaPredicted RBP15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 OR4D1Q15615 310 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 CRY1Q16526 586 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TIGD2Q4W5G0 525 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 MANEALQ5VSG8 457 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 DSELQ8IZU8 1212 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 SPDL1Q96EA4 605 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 SPATA17Q96L03 361 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TBCDQ9BTW9 1192 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 TDRD1Q9BXT4 1180 aaKnown RBP15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 MFSD1Q9H3U5 465 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 THEGQ9P2T0 379 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 A0A0G2JMZ2 1700 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 RNF103-CHMP3A0A140T963 221 aa15.79■□□□□ 0.12
SMARCD1-202ENST00000394963 PCDH8O95206 1070 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms