RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CHCHD4Q8N4Q1 142 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 EFHBQ8N7U6 833 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 DCAF4L2Q8NA75 395 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 BHLHE22Q8NFJ8 381 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ADCY4Q8NFM4 1077 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MDGA1Q8NFP4 955 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 TWIST2Q8WVJ9 160 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 GATA6Q92908 595 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SPDL1Q96EA4 605 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 GPR21Q99679 349 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 NPAS2Q99743 824 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CLSTN3Q9BQT9 956 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 EFHD1Q9BUP0 239 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 C2orf49Q9BVC5 232 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 TRIM15Q9C019 465 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CCDC167Q9P0B6 97 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 DLGAP2Q9P1A6 1054 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 CROTQ9UKG9 612 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ADAMTS6Q9UKP5 1117 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 FAM50BQ9Y247 325 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 ZNF510Q9Y2H8 683 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 NDUFAF1Q9Y375 327 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 MTF2Q9Y483 593 aaPredicted RBP7.16□□□□□ -1.26
SMAD1-202ENST00000394092 SLC30A1Q9Y6M5 507 aa7.16□□□□□ -1.26
SMAD1-202ENST00000394092 BPTFQ12830 3046 aa7.15□□□□□ -1.26
SMAD1-202ENST00000394092 ANKRD12Q6UB98 2062 aa7.15□□□□□ -1.26
SMAD1-202ENST00000394092 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 BTN3A1O00481 513 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 UBFD1O14562 309 aaKnown RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 KIF3CO14782 793 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ANGPT2O15123 496 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 KLK8O60259 260 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TSPAN3O60637 253 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ECI2O75521 394 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SORBS2O94875 1100 aaKnown RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 CDK14O94921 469 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 UPP2O95045 317 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 MATN4O95460 622 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SEC24AO95486 1093 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 PRLP01236 227 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 F11P03951 625 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 S100BP04271 92 aaPredicted RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 MTHFD2P13995 350 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 IDO1P14902 403 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 EEF1DP29692 281 aaKnown RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 MRPL19P49406 292 aaKnown RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 PKNOX1P55347 436 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 CCL23P55773 120 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 IL2P60568 153 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SH3BP2P78314 561 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 MRPS22P82650 360 aaKnown RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TIAL1Q01085 375 aaKnown RBP eCLIP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 CACNG1Q06432 222 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 FOXM1Q08050 763 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TRAF2Q12933 501 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 GRIK2Q13002 908 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 RAB33AQ14088 237 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 LRP8Q14114 963 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TRIM25Q14258 630 aaKnown RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 PTPRCAPQ14761 206 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 RPS6KA2Q15349 733 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TCTN1Q2MV58 587 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SPATS1Q496A3 300 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ARSIQ5FYB1 569 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ARMC12Q5T9G4 340 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 IRAK1BP1Q5VVH5 260 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 LYPLAL1Q5VWZ2 237 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 LPCAT4Q643R3 524 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 CLEC6AQ6EIG7 209 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 PAQR3Q6TCH7 311 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ANKRD33Q7Z3H0 272 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SPATA19Q7Z5L4 167 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 DEFB128Q7Z7B8 93 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ADAMTSL2Q86TH1 951 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SPATA24Q86W54 205 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 DDIASQ8IXT1 998 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 GPR65Q8IYL9 337 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TCEAL8Q8IYN2 117 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 ST13P4Q8IZP2 240 aaPredicted RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 EFCAB3Q8N7B9 438 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 OR56A4Q8NGH8 313 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 SHKBP1Q8TBC3 707 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TSPEARQ8WU66 669 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 UCMAQ8WVF2 138 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 PBXIP1Q96AQ6 731 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 MYO19Q96H55 970 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TOX2Q96NM4 488 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TRAPPC9Q96Q05 1148 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 HOPXQ9BPY8 73 aaPredicted RBP7.15□□□□□ -1.27
SMAD1-202ENST00000394092 GPR63Q9BZJ6 419 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 FAM192AQ9GZU8 254 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 MAGEE1Q9HCI5 957 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TNFRSF12AQ9NP84 129 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 GKN1Q9NS71 199 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 RIC8BQ9NVN3 520 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 TMEM45AQ9NWC5 275 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 GID8Q9NWU2 228 aa7.15□□□□□ -1.27
SMAD1-202ENST00000394092 NUDT4Q9NZJ9 180 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms