RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PCK1P35558 622 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 MC1RQ01726 317 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 NFATC2Q13469 925 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 NCAPHQ15003 741 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 MARC1Q5VT66 337 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 ALG1LQ6GMV1 187 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 RBM43Q6ZSC3 357 aaKnown RBP15.23■□□□□ 0.03
CHMP3-202ENST00000393773 TEX26Q8N6G2 289 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 NCSTNQ92542 709 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 RIOK2Q9BVS4 552 aaKnown RBP15.23■□□□□ 0.03
CHMP3-202ENST00000393773 HSD3B7Q9H2F3 369 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 TRIT1Q9H3H1 467 aaKnown RBP15.23■□□□□ 0.03
CHMP3-202ENST00000393773 NT5MQ9NPB1 228 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHMP3-202ENST00000393773 KCNK6Q9Y257 313 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 KCNMB2Q9Y691 235 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 ITPR2Q14571 2701 aa15.23■□□□□ 0.03
CHMP3-202ENST00000393773 NOTCH2Q04721 2471 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 CENPEQ02224 2701 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 LILRA5A6NI73 299 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 K7EM74 188 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 ATP1A1P05023 1023 aaKnown RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 CCDC172P0C7W6 258 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 TCN2P20062 427 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 ARL4AP40617 200 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 MAPK9P45984 424 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 PPM1FP49593 454 aaPredicted RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 GFERP55789 205 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 KLRB1Q12918 225 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 E4F1Q66K89 784 aaPredicted RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 IYDQ6PHW0 289 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 CHST15Q7LFX5 561 aaPredicted RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 KDELC2Q7Z4H8 507 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 ESX1Q8N693 406 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 EXD1Q8NHP7 514 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 ZNF653Q96CK0 615 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 WDR24Q96S15 920 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 HERPUD2Q9BSE4 406 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 TBC1D10AQ9BXI6 508 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 TDRD1Q9BXT4 1180 aaKnown RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 STN1Q9H668 368 aaKnown RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 CNOT8Q9UFF9 292 aaKnown RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 KLHL3Q9UH77 587 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 CNOT6Q9ULM6 557 aaKnown RBP15.22■□□□□ 0.03
CHMP3-202ENST00000393773 MYO6Q9UM54 1294 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 KCTD3Q9Y597 815 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 RPS6KL1Q9Y6S9 549 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 SCINQ9Y6U3 715 aa15.22■□□□□ 0.03
CHMP3-202ENST00000393773 RP1L1Q8IWN7 2480 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-202ENST00000393773 BLACEA4D250 179 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 LRRC10BA6NIK2 292 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 FADS2P1A8MWK0 482 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-202ENST00000393773 MTSS1O43312 755 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 ACP5P13686 325 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 F3P13726 295 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 ZNF28P17035 718 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 SERPINB6P35237 376 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 UBE2IP63279 158 aaKnown RBP15.21■□□□□ 0.03
CHMP3-202ENST00000393773 MYL5Q02045 173 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 HENMT1Q5T8I9 393 aaKnown RBP15.21■□□□□ 0.03
CHMP3-202ENST00000393773 TXNRD3NBQ6F5E7 133 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 C16orf46Q6P387 395 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 SLC9B2Q86UD5 537 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 RAVER1Q8IY67 606 aaKnown RBP15.21■□□□□ 0.03
CHMP3-202ENST00000393773 ANKRD20A12PQ8NF67 263 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 HSPH1Q92598 858 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 SH3KBP1Q96B97 665 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 POLR1EQ9GZS1 481 aaKnown RBP15.21■□□□□ 0.03
CHMP3-202ENST00000393773 EPB41L1Q9H4G0 881 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 PCDH18Q9HCL0 1135 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 OGFRQ9NZT2 677 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 ZNHIT2Q9UHR6 403 aa15.21■□□□□ 0.03
CHMP3-202ENST00000393773 KIR2DS5A0A0G2JLQ3 304 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 A0A0G2JNG1 304 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 KIR2DS3K7RE56 304 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 MFSD11O43934 449 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 ASMTLO95671 621 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 PRLP01236 227 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 C9P02748 559 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 FURINP09958 794 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 SLC2A4P14672 509 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 DSC2Q02487 901 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 SEPT6Q14141 434 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 KIR2DS5Q14953 304 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 TCTN3Q6NUS6 607 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 LYSMD3Q7Z3D4 306 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 ZNF571Q7Z3V5 609 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-202ENST00000393773 NDUFAF2Q8N183 169 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 RNF31Q96EP0 1072 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 LYSMD1Q96S90 227 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-202ENST00000393773 ULBP3Q9BZM4 244 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 CROTQ9UKG9 612 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 DNPEPQ9ULA0 475 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 ADGRG1Q9Y653 693 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 CRYBG3Q68DQ2 2970 aa15.2■□□□□ 0.02
CHMP3-202ENST00000393773 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms