RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 AURKAO14965 403 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 GABBR2O75899 941 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 FMO3P31513 532 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 EPHX2P34913 555 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 PIK3CGP48736 1102 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 UGT3A1Q6NUS8 523 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 AQP12AQ8IXF9 295 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 CHCHD6Q9BRQ6 235 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 AMBNQ9NP70 447 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SMOXQ9NWM0 555 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 CRLS1Q9UJA2 301 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 PTBP2Q9UKA9 531 aaKnown RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 ZNF232Q9UNY5 417 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SLC12A8A0AV02 714 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 KLRG2A4D1S0 409 aaPredicted RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 HTR3EA5X5Y0 456 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SOCS2O14508 198 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 IFNA8P32881 189 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 GPRIN3Q6ZVF9 776 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 BBS7Q8IWZ6 715 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 TMEM132CQ8N3T6 1108 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 LPCAT1Q8NF37 534 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SHKBP1Q8TBC3 707 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 SLC35F5Q8WV83 523 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 DYRK4Q9NR20 520 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 KRT84Q9NSB2 600 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 PADI4Q9UM07 663 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 TCAF1Q9Y4C2 921 aa14.2□□□□□ -0.14
RTF1-201ENST00000389629 POLR3HQ9Y535 204 aaPredicted RBP14.2□□□□□ -0.14
RTF1-201ENST00000389629 ZNF99A8MXY4 864 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 IGFBP5P24593 272 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 TKTP29401 623 aaKnown RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 OR1E1P30953 314 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 CHRNA4P43681 627 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 PMS2P3Q13401 168 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 RABL3Q5HYI8 236 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 OLIG1Q8TAK6 271 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 MUS81Q96NY9 551 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 SMIM28A0A1B0GU29 152 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 CCRL2O00421 344 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 TBX4P57082 545 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 SPDYE7PQ495Y7 208 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 TMEM126BQ8IUX1 230 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 TRPV3Q8NET8 790 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 ST13P5Q8NFI4 369 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 CLPBQ9H078 707 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 NMRK2Q9NPI5 230 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 AIREO43918 545 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 RXRGP48443 463 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 MEP1AQ16819 746 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 NEK5Q6P3R8 708 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 MZB1Q8WU39 189 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 RBM4BQ9BQ04 359 aaKnown RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 RBM4Q9BWF3 364 aaKnown RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 ZNHIT2Q9UHR6 403 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 RAPGEFL1Q9UHV5 662 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 MOSPD1Q9UJG1 213 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 LRFN2Q9ULH4 789 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 ADAMTSL3P82987 1691 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 C17orf102A2RUQ5 167 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 TRIM64CA6NLI5 447 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 FGF10O15520 208 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 SIX3O95343 332 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 IRF1P10914 325 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 KRT20P35900 424 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 GRIA2P42262 883 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 OR1G1P47890 313 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 C1DQ13901 141 aaKnown RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 PIGGQ5H8A4 983 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 OVOS1Q6IE37 1185 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 PAWRQ96IZ0 340 aaKnown RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 FCRL2Q96LA5 508 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 TMEM74Q96NL1 305 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 PIGVQ9NUD9 493 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 UXTQ9UBK9 157 aaPredicted RBP14.19□□□□□ -0.14
RTF1-201ENST00000389629 OGDHLQ9ULD0 1010 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 CARD8Q9Y2G2 431 aa14.19□□□□□ -0.14
RTF1-201ENST00000389629 MOXD2PA6NHM9 499 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 DAG1Q14118 895 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 NCF4Q15080 339 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 PTPRNQ16849 979 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GPR180Q86V85 440 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 HS6ST3Q8IZP7 471 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 PACRGLQ8N7B6 248 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 TEX12Q9BXU0 123 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 AKTIPQ9H8T0 292 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GOLGA4Q13439 2230 aaKnown RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 YJEFN3A6XGL0 299 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 BMP10O95393 424 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 ENO2P09104 434 aaPredicted RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 CD97P48960 835 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 IL2P60568 153 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 ANKDD1AQ495B1 522 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 GLT6D1Q7Z4J2 308 aa14.18□□□□□ -0.14
RTF1-201ENST00000389629 R3HCC1LQ7Z5L2 792 aaKnown RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 ZNF420Q8TAQ5 688 aaPredicted RBP14.18□□□□□ -0.14
RTF1-201ENST00000389629 H3BN98 237 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms