RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SP100P23497 879 aaPredicted RBP25.05■■□□□ 1.6
SHOX2-201ENST00000389589 OR4D1Q15615 310 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 RINLQ6ZS11 566 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 TPRG1Q6ZUI0 275 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 USP45Q70EL2 814 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 ZSWIM9Q86XI8 627 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 TMPRSS6Q8IU80 811 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 VOPP1Q96AW1 172 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 FAM136AQ96C01 138 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 ATOH8Q96SQ7 321 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 MIPEPQ99797 713 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 CCDC28BQ9BUN5 200 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 TAS2R1Q9NYW7 299 aa25.05■■□□□ 1.6
SHOX2-201ENST00000389589 H3BMM5 538 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 PRMT5O14744 637 aaPredicted RBP25.04■■□□□ 1.6
SHOX2-201ENST00000389589 KERAO60938 352 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 MNAT1P51948 309 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 HERVK_113P63132 956 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 CBX2Q14781 532 aaPredicted RBP25.04■■□□□ 1.6
SHOX2-201ENST00000389589 SH2D4BQ5SQS7 431 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 ZNF678Q5SXM1 525 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 FAM151BQ6UXP7 276 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 DPY19L3Q6ZPD9 716 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 ERVK-6Q9BXR3 956 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 CADM1Q9BY67 442 aaKnown RBP25.04■■□□□ 1.6
SHOX2-201ENST00000389589 SHCBP1LQ9BZQ2 653 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 ZDHHC6Q9H6R6 413 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 GTSE1Q9NYZ3 720 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 SLCO3A1Q9UIG8 710 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 CDYLQ9Y232 598 aa25.04■■□□□ 1.6
SHOX2-201ENST00000389589 B2RBV5 119 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 E5RI56 91 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 BNIP3LO60238 219 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 ZNF7P17097 686 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 RPS3P23396 243 aaKnown RBP eCLIP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 FAM109BQ6ICB4 259 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 ITFG1Q8TB96 612 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 ASB2Q96Q27 587 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 GSTO2Q9H4Y5 243 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 ERVW-1Q9UQF0 538 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 SYCE1LA8MT33 242 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 WASH3PC4AMC7 463 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 GAPDHSO14556 408 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 GSC2O15499 205 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 NIPSNAP2O75323 286 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 HNRNPLP14866 589 aaKnown RBP eCLIP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 SPAM1P38567 509 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 RECQLP46063 649 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 KDSRQ06136 332 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 NFATC2Q13469 925 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 GPR33Q49SQ1 333 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 C9orf50Q5SZB4 431 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 OR52B2Q96RD2 323 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 MCCC1Q96RQ3 725 aaPredicted RBP25.03■■□□□ 1.6
SHOX2-201ENST00000389589 NUF2Q9BZD4 464 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 ASB8Q9H765 288 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 IL26Q9NPH9 171 aa25.03■■□□□ 1.6
SHOX2-201ENST00000389589 GLYATL1P3A0A0U1RQE8 302 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 PAPLNO95428 1278 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 BPIP17213 487 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 CHRM3P20309 590 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 IL2P60568 153 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 CRTC1Q6UUV9 634 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 ADGRD2Q7Z7M1 963 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 SERPINA9Q86WD7 417 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 RBFAQ8N0V3 343 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 ARHGAP24Q8N264 748 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 CD200R1Q8TD46 325 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 C1orf21Q9H246 121 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 BAIAP2L1Q9UHR4 511 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 FBXO10Q9UK96 956 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 RNF112Q9ULX5 631 aa25.02■■□□□ 1.6
SHOX2-201ENST00000389589 TRBV5-4A0A0C4DH59 114 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 NPIPB15A6NHN6 443 aaPredicted RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 NNMTP40261 264 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 POLR2LP62875 67 aaKnown RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 CUZD1Q86UP6 607 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 PTGR2Q8N8N7 351 aaPredicted RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 SIDT2Q8NBJ9 832 aaKnown RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 MCUR1Q96AQ8 359 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 CMTM5Q96DZ9 223 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 CLPBQ9H078 707 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 MMADHCQ9H3L0 296 aaPredicted RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 DUS2Q9NX74 493 aaKnown RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 E9PBE3 544 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 KLHL41O60662 606 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 WFS1O76024 890 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 SUPT7LO94864 414 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 MTHFD2P13995 350 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 PRDX6P30041 224 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 DHCR24Q15392 516 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 UNC50Q53HI1 259 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 Q6ZVU0 165 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 EXT2Q93063 718 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 WDR55Q9H6Y2 383 aaPredicted RBP25.01■■□□□ 1.59
SHOX2-201ENST00000389589 GALPQ9UBC7 116 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 TMCO1Q9UM00 188 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 SLC8A2Q9UPR5 921 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 C2orf16Q68DN1 1984 aa25.01■■□□□ 1.59
SHOX2-201ENST00000389589 UBXN8O00124 270 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms