RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 WISP3O95389 354 aaPredicted RBP16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 CCL23P55773 120 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 FUT11Q495W5 492 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 SLAMF8Q9P0V8 285 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 TIMM22Q9Y584 194 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 PCDHB7Q9Y5E2 793 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 ANGPT2O15123 496 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 INPP4BO15327 924 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 ATE1O95260 518 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 STAMBPO95630 424 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 HGFP14210 728 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 CYP2C18P33260 490 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 ACADVLP49748 655 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 ZNF135P52742 658 aaPredicted RBP16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 MERTKQ12866 999 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 C16orf72Q14CZ0 275 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 DEFB128Q7Z7B8 93 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 PHYKPLQ8IUZ5 450 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 PCYOX1LQ8NBM8 494 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 L3HYPDHQ96EM0 354 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 SEMA3CQ99985 751 aa16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 TSR3Q9UJK0 312 aaKnown RBP16.19■□□□□ 0.18
NKX3-1-201ENST00000380871 TSPAN3O60637 253 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 ALDH2P05091 517 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CD1DP15813 335 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 HOXC13P31276 330 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CASP2P42575 452 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 TM4SF4P48230 202 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 POLD3Q15054 466 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC14A2Q15849 920 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 SIRPB2Q5JXA9 342 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 ELMSAN1Q6PJG2 1045 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 FAM43BQ6ZT52 329 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CCDC117Q8IWD4 279 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 ALDH16A1Q8IZ83 802 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 ADGRG5Q8IZF4 528 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 LGI2Q8N0V4 545 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CLYBLQ8N0X4 340 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 LZTR1Q8N653 840 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 TSPAN17Q96FV3 270 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 IMP4Q96G21 291 aaKnown RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 TMEM74Q96NL1 305 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 POLG2Q9UHN1 485 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 IKZF3Q9UKT9 509 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 FAF1Q9UNN5 650 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 A0A0U1RQS6 177 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 TBKBP1A7MCY6 615 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 BMP10O95393 424 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 MTHFD2P13995 350 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 PMS2P3Q13401 168 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CYP51A1Q16850 503 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 PLA2G4EQ3MJ16 856 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 PYCR3Q53H96 274 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 RTP2Q5QGT7 225 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 TIGD7Q6NT04 549 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 HACD2Q6Y1H2 254 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 DCBLD1Q8N8Z6 715 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 HM13Q8TCT9 377 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 ROPN1LQ96C74 230 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC25A51Q9H1U9 297 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 SEMA4BQ9NPR2 832 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 ABCD2Q9UBJ2 740 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 SQORQ9Y6N5 450 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 LAMA2P24043 3122 aaKnown RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CD247P20963 164 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 VARSP26640 1264 aaKnown RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 PRDX3P30048 256 aaKnown RBP16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 PLCL1Q15111 1095 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 GPR180Q86V85 440 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 MIER2Q8N344 545 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 OR7D4Q8NG98 312 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 CALML6Q8TD86 181 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 LRRC58Q96CX6 371 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 FBXO44Q9H4M3 255 aa16.18■□□□□ 0.18
NKX3-1-201ENST00000380871 A0A0D9SEW6 157 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 NCF1BA6NI72 391 aaPredicted RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 NCF1CA8MVU1 366 aaPredicted RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ACOX3O15254 700 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ADAM12O43184 909 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 RAMP2O60895 175 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 BAIAP3O94812 1187 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 NCF1P14598 390 aaPredicted RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 PSMA4P25789 261 aaKnown RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 SLC11A1P49279 550 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 RENBPP51606 427 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ATP6V0D1P61421 351 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 TUBA4AP68366 448 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 TNK2Q07912 1038 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 GALNT1Q10472 559 aaPredicted RBP16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 GPR107Q5VW38 600 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 AFMIDQ63HM1 303 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 CAMK1DQ8IU85 385 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 PGBD5Q8N414 524 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ATP6V0D2Q8N8Y2 350 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 OR13C4Q8NGS5 318 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 NUDT8Q8WV74 236 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 ATP13A1Q9HD20 1204 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 VPS45Q9NRW7 570 aa16.17■□□□□ 0.18
NKX3-1-201ENST00000380871 SCML2Q9UQR0 700 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms