RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 H3BNX3 289 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 TOMM70O94826 608 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CYP11A1P05108 521 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 NEK2P51955 445 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 NR6A1Q15406 480 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CPSF6Q16630 551 aaKnown RBP eCLIP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 IRGCQ6NXR0 463 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 SPRED2Q7Z698 418 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 HERC6Q8IVU3 1022 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 BBS5Q8N3I7 341 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CALML6Q8TD86 181 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 AURKBQ96GD4 344 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 SLC39A13Q96H72 371 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 TSGA13Q96PP4 275 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 EXD2Q9NVH0 621 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 UBAP1Q9NZ09 502 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 U3KQV3 271 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 MAGEA13PA6NCF6 341 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 TMEM114B3SHH9 223 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 NRG2O14511 850 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 AZIN1O14977 448 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 SYNCRIPO60506 623 aaKnown RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 SNRPB2P08579 225 aaKnown RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 SELPP16109 830 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CAPN3P20807 821 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 HOXD9P28356 352 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 GABRR2P28476 465 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 IST1P53990 364 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 LAPTM5Q13571 262 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 KRT80Q6KB66 452 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 ANKS3Q6ZW76 656 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CMTM8Q8IZV2 173 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 METTL6Q8TCB7 284 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 ASB8Q9H765 288 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CROTQ9UKG9 612 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 PKP3Q9Y446 797 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 STAMBPO95630 424 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 NFKBIAP25963 317 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CLCN5P51795 746 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 AIF1P55008 147 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 DEFB103AP81534 67 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 TLE2Q04725 743 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CLCQ05315 142 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 TRIM71Q2Q1W2 868 aaKnown RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 SLC2A7Q6PXP3 512 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 MFN1Q8IWA4 741 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 ADGRG2Q8IZP9 1017 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 AFAP1L2Q8N4X5 818 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 ING5Q8WYH8 240 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 ASIC4Q96FT7 647 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 VPS50Q96JG6 964 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CORO1BQ9BR76 489 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 MMADHCQ9H3L0 296 aaPredicted RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 INTS7Q9NVH2 962 aaKnown RBP12.62□□□□□ -0.39
TTC39B-202ENST00000380850 HCFC1R1Q9NWW0 138 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
TTC39B-202ENST00000380850 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 C2orf81A6NN90 581 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 PSMD3O43242 534 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 NRP2O60462 931 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 RPP40O75818 363 aaKnown RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 STC2O76061 302 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 CRTAMO95727 393 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 RBP1P09455 135 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 CD1DP15813 335 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ZNF37AP17032 561 aaPredicted RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 DSC1Q08554 894 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 NAB1Q13506 487 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ZNF423Q2M1K9 1284 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ZNF678Q5SXM1 525 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 UMODL1-AS1Q8N2C9 162 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 BEND7Q8N7W2 519 aaPredicted RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 RP9Q8TA86 221 aaKnown RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 CIPCQ9C0C6 399 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 TUBB1Q9H4B7 451 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 TMEM248Q9NWD8 314 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 TAS2R13Q9NYV9 303 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ANKRD6Q9Y2G4 727 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ANTXRLA6NF34 631 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 MAN1A2O60476 641 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 FKBP6O75344 327 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 OAZ2O95190 189 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 APOA4P06727 396 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 TYMPP19971 482 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ATP6V1B2P21281 511 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 PRKAA2P54646 552 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 ZXDBP98169 803 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 BTG3Q14201 252 aaPredicted RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 DEFB115Q30KQ5 88 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 RARS2Q5T160 578 aaKnown RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 FAM180BQ6P0A1 224 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 RBM23Q86U06 439 aaKnown RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 PNPT1Q8TCS8 783 aaKnown RBP12.61□□□□□ -0.39
TTC39B-202ENST00000380850 TSPAN17Q96FV3 270 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 CASD1Q96PB1 797 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 TMEM79Q9BSE2 394 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 DCUN1D5Q9BTE7 237 aa12.61□□□□□ -0.39
TTC39B-202ENST00000380850 CERS4Q9HA82 394 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms