RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SEPHS1P49903 392 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 GFERP55789 205 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 PTSQ03393 145 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 MARC1Q5VT66 337 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 PLEKHA7Q6IQ23 1121 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 SLC9B2Q86UD5 537 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 NDUFAF2Q8N183 169 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 GALNT6Q8NCL4 622 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 ANKRD20A12PQ8NF67 263 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 PIH1D2Q8WWB5 315 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 SARS2Q9NP81 518 aaKnown RBP17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 MYO1AQ9UBC5 1043 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 CROTQ9UKG9 612 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 KCTD3Q9Y597 815 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 KCNMB2Q9Y691 235 aa17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 OAS3Q9Y6K5 1087 aaKnown RBP17.62■□□□□ 0.41
PDLIM4-202ENST00000379018 NOTCH2Q04721 2471 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 CDC14CA4D256 554 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 LGALS16A8MUM7 142 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 MKRN2OSH3BPM6 223 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 MAFKO60675 156 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 DNAJC6O75061 913 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 LRCH4O75427 683 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 IYDQ6PHW0 289 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 ASB18Q6ZVZ8 466 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 TMEM135Q86UB9 458 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 EXD1Q8NHP7 514 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 SH3KBP1Q96B97 665 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 ZNF653Q96CK0 615 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 STAMBPL1Q96FJ0 436 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 OSGEPL1Q9H4B0 414 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 ARFGAP3Q9NP61 516 aa17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.61■□□□□ 0.41
PDLIM4-202ENST00000379018 TMEM191CA6NGB0 347 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 AGFG2O95081 481 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 FURINP09958 794 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 CCDC172P0C7W6 258 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 TCF4P15884 667 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 TYRP1P17643 537 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 IL1R2P27930 398 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 HCAR3P49019 387 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 SH3BP2P78314 561 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 PLA2G4EQ3MJ16 856 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 CT47A1Q5JQC4 288 aaPredicted RBP17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 C6orf15Q6UXA7 325 aaPredicted RBP17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 RASGRP3Q8IV61 690 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 COX14Q96I36 57 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 TGM7Q96PF1 710 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 HERPUD2Q9BSE4 406 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 PRDM8Q9NQV8 689 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 LNPEPQ9UIQ6 1025 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 CHKBQ9Y259 395 aa17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 TNRC6AQ8NDV7 1962 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-202ENST00000379018 RP1L1Q8IWN7 2480 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 ZNF106Q9H2Y7 1883 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 NBPF19A0A087WUL8 3843 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 A0A0J9YYE9 177 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 KIAA0754O94854 1291 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 CLDN7O95471 211 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 TRBC1P01850 177 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 PYGLP06737 847 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 F3P13726 295 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 SLC2A4P14672 509 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 ZNF30P17039 623 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 CDK11BP21127 795 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 ZNF135P52742 658 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 STC1P52823 247 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 EPHA4P54764 986 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 CDH6P55285 790 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 DSC2Q02487 901 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 RALGPS1Q5JS13 557 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 ZNF765Q7L2R6 523 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 LYSMD3Q7Z3D4 306 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 POLNQ7Z5Q5 900 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 PLXDC1Q8IUK5 500 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 PSTKQ8IV42 348 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 CCDC13Q8IYE1 715 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 LPCAT1Q8NF37 534 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 CSPG4P5Q96PW8 444 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 OR6C1Q96RD1 312 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 SIDT1Q9NXL6 827 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 CPNE7Q9UBL6 633 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 POLHQ9Y253 713 aa17.59■□□□□ 0.41
PDLIM4-202ENST00000379018 RFPL1O75677 317 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 RASSF9O75901 435 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 DNAJB5O75953 348 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 GNLYP22749 145 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 SERPINB6P35237 376 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 SEPT7Q16181 437 aaKnown RBP17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 DPYSL2Q16555 572 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 ZNF648Q5T619 568 aaPredicted RBP17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 CRTC3Q6UUV7 619 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 PHYKPLQ8IUZ5 450 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 TRIM48Q8IWZ4 208 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 EFCAB3Q8N7B9 438 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 TWSG1Q9GZX9 223 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 TLK1Q9UKI8 766 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 PPIL1Q9Y3C6 166 aa17.58■□□□□ 0.4
PDLIM4-202ENST00000379018 MN1Q10571 1320 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms