RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GBA3Q9H227 469 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 TRABDQ9H4I3 376 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 RMI1Q9H9A7 625 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 RABGEF1Q9UJ41 708 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 APPL1Q9UKG1 709 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ADAMTS20P59510 1910 aa16.7■□□□□ 0.26
HMGN4-201ENST00000377575 ZNF106Q9H2Y7 1883 aaKnown RBP16.69■□□□□ 0.26
HMGN4-201ENST00000377575 LOC285095A0A1B0GVY8 99 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 FADS2P1A8MWK0 482 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 D6RAR5 112 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 ZW10O43264 779 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 EPOP01588 193 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 RPLP0P05388 317 aaKnown RBP16.69■□□□□ 0.26
HMGN4-201ENST00000377575 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 RBL1P28749 1068 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 EIF3EP60228 445 aaKnown RBP16.69■□□□□ 0.26
HMGN4-201ENST00000377575 BIRC2Q13490 618 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 PYCR3Q53H96 274 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 ALS2CLQ60I27 953 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 TRAM1L1Q8N609 369 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 IPMKQ8NFU5 416 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 EID2BQ96D98 161 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 MRGPRX2Q96LB1 330 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 HERPUD2Q9BSE4 406 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 LRRN3Q9H3W5 708 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 POLR1BQ9H9Y6 1135 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 SPATS2LQ9NUQ6 558 aaKnown RBP16.69■□□□□ 0.26
HMGN4-201ENST00000377575 HACD3Q9P035 362 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 LRIT1Q9P2V4 623 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 TRIM10Q9UDY6 481 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 ENTPD2Q9Y5L3 495 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 RNF215Q9Y6U7 377 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 URB1O60287 2271 aaKnown RBP16.69■□□□□ 0.26
HMGN4-201ENST00000377575 UNC13CQ8NB66 2214 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 KIF26BQ2KJY2 2108 aa16.69■□□□□ 0.26
HMGN4-201ENST00000377575 F5H423 210 aaPredicted RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 TMX2-CTNND1H3BSU7 103 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 ANXA9O76027 345 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 MPOP05164 745 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 FGF1P05230 155 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 RBP3P10745 1247 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 PYGMP11217 842 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 LSSP48449 732 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 GEMP55040 296 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 CCL7P80098 99 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 SLC1A5Q15758 541 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 TBC1D25Q3MII6 688 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 C3orf38Q5JPI3 329 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 SIRPB2Q5JXA9 342 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 SPRED1Q7Z699 444 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 PHYKPLQ8IUZ5 450 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 GPR26Q8NDV2 337 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 SNIP1Q8TAD8 396 aaKnown RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 ATXN7L3BQ96GX2 97 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 OXNAD1Q96HP4 312 aaPredicted RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 ZNF578Q96N58 590 aaPredicted RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 DCBLD2Q96PD2 775 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 PPP1R2P1Q96PQ5 205 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 PLEKHG4BQ96PX9 1271 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 ZNHIT2Q9UHR6 403 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 CNOT6Q9ULM6 557 aaKnown RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 SATB2Q9UPW6 733 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 SPO11Q9Y5K1 396 aa16.68■□□□□ 0.26
HMGN4-201ENST00000377575 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
HMGN4-201ENST00000377575 FAM208BQ5VWN6 2430 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 CHD6Q8TD26 2715 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 A0A087WV48 116 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 RHPN2P1A8MT19 583 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 GPR89AB7ZAQ6 455 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 KCNN4O15554 427 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 RRP8O43159 456 aaKnown RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 DNAJC6O75061 913 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 DXOO77932 396 aaKnown RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 ECEL1O95672 775 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 FTCDO95954 541 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 GPR89BP0CG08 455 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 HMGCLP35914 325 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 PDX1P52945 283 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 MAZP56270 477 aaKnown RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 PRPSAP1Q14558 356 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 ZDHHC20Q5W0Z9 365 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 DARS2Q6PI48 645 aaKnown RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 LRRC69Q6ZNQ3 347 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 GLT6D1Q7Z4J2 308 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 C17orf82Q86X59 251 aaPredicted RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 SLC25A41Q8N5S1 370 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 RNF10Q8N5U6 811 aaKnown RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 Q8N9G6 341 aaPredicted RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 TTC13Q8NBP0 860 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 WDR36Q8NI36 951 aaKnown RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 FGF11Q92914 225 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 LIN37Q96GY3 246 aaPredicted RBP16.67■□□□□ 0.26
HMGN4-201ENST00000377575 TMEM74Q96NL1 305 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 STRADBQ9C0K7 418 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 CARD9Q9H257 536 aa16.67■□□□□ 0.26
HMGN4-201ENST00000377575 PACSIN2Q9UNF0 486 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms