RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PPM1FP49593 454 aaPredicted RBP20.88■□□□□ 0.93
VSX1-201ENST00000376707 PPIDQ08752 370 aaKnown RBP20.88■□□□□ 0.93
VSX1-201ENST00000376707 TRA2AQ13595 282 aaKnown RBP eCLIP20.88■□□□□ 0.93
VSX1-201ENST00000376707 TCEAL1Q15170 157 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 QPCTQ16769 361 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 MANEAQ5SRI9 462 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 SARM1Q6SZW1 724 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 RHOT2Q8IXI1 618 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 OR4D9Q8NGE8 314 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 DPYSL5Q9BPU6 564 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 MAK16Q9BXY0 300 aaKnown RBP20.88■□□□□ 0.93
VSX1-201ENST00000376707 SEMA4CQ9C0C4 833 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 B3GNT4Q9C0J1 378 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 FAM83DQ9H4H8 585 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 INTUQ9ULD6 942 aa20.88■□□□□ 0.93
VSX1-201ENST00000376707 TRBV23OR9-2A0A075B6M9 112 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 ANKRD66B4E2M5 251 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 MMP2P08253 660 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 LIMK2P53671 638 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 IFI35P80217 286 aaPredicted RBP20.87■□□□□ 0.93
VSX1-201ENST00000376707 AP1B1Q10567 949 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 ZBTB17Q13105 803 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 LRRC38Q5VT99 294 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 CHST15Q7LFX5 561 aaPredicted RBP20.87■□□□□ 0.93
VSX1-201ENST00000376707 PLD5Q8N7P1 536 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 CNTD1Q8N815 330 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 SLC37A2Q8TED4 501 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 SGF29Q96ES7 293 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 MED8Q96G25 268 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 AHCYL2Q96HN2 611 aaKnown RBP20.87■□□□□ 0.93
VSX1-201ENST00000376707 WDR24Q96S15 920 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 SLC38A3Q99624 504 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 PRKAB1Q9Y478 270 aa20.87■□□□□ 0.93
VSX1-201ENST00000376707 OAS3Q9Y6K5 1087 aaKnown RBP20.87■□□□□ 0.93
VSX1-201ENST00000376707 ARHGEF17Q96PE2 2063 aaPredicted RBP20.87■□□□□ 0.93
VSX1-201ENST00000376707 RGSL1A5PLK6 1076 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 C3orf70A6NLC5 250 aaPredicted RBP20.86■□□□□ 0.93
VSX1-201ENST00000376707 AKR1B15C9JRZ8 316 aaPredicted RBP20.86■□□□□ 0.93
VSX1-201ENST00000376707 APOL1O14791 398 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 DNAJC6O75061 913 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 FASLGP48023 281 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 GPLD1P80108 840 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 SRSF6Q13247 344 aaKnown RBP20.86■□□□□ 0.93
VSX1-201ENST00000376707 SQSTM1Q13501 440 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 GALNT3Q14435 633 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 ODF2Q5BJF6 829 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 HENMT1Q5T8I9 393 aaKnown RBP20.86■□□□□ 0.93
VSX1-201ENST00000376707 VASH2Q86V25 355 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 SFRP1Q8N474 314 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 AGBL5Q8NDL9 886 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 CCDC112Q8NEF3 446 aa20.86■□□□□ 0.93
VSX1-201ENST00000376707 CNOT6Q9ULM6 557 aaKnown RBP20.86■□□□□ 0.93
VSX1-201ENST00000376707 ATMQ13315 3056 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 SCN8AQ9UQD0 1980 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 FADS2P1A8MWK0 482 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 KRT1P04264 644 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 MPSTP25325 297 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 CSF2RBP32927 897 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 CSTF2P33240 577 aaKnown RBP eCLIP20.85■□□□□ 0.93
VSX1-201ENST00000376707 PDK1Q15118 436 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 SLC9A4Q6AI14 798 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 LYSMD3Q7Z3D4 306 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 ZNF761Q86XN6 746 aaPredicted RBP20.85■□□□□ 0.93
VSX1-201ENST00000376707 DTX1Q86Y01 620 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 ZSCAN1Q8NBB4 408 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 OR10G6Q8NH81 332 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 TAAR9Q96RI9 348 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 ANP32EQ9BTT0 268 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 CEP41Q9BYV8 373 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 STN1Q9H668 368 aaKnown RBP20.85■□□□□ 0.93
VSX1-201ENST00000376707 RMI1Q9H9A7 625 aa20.85■□□□□ 0.93
VSX1-201ENST00000376707 PCYT1BQ9Y5K3 369 aaPredicted RBP20.85■□□□□ 0.93
VSX1-201ENST00000376707 STMND1H3BQB6 276 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 PPP1R12AO14974 1030 aaPredicted RBP20.84■□□□□ 0.93
VSX1-201ENST00000376707 EML2O95834 649 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 THRAP10827 490 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 FGF3P11487 239 aaPredicted RBP20.84■□□□□ 0.93
VSX1-201ENST00000376707 ACP5P13686 325 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 ZFXP17010 805 aaPredicted RBP20.84■□□□□ 0.93
VSX1-201ENST00000376707 SLC1A1P43005 524 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 HHEXQ03014 270 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 TMEM71Q6P5X7 295 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 KDELC2Q7Z4H8 507 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 RFX6Q8HWS3 928 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 AGAP3Q96P47 875 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 ZFYVE1Q9HBF4 777 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 TMEM9Q9P0T7 183 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 TBC1D29Q9UFV1 150 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 KCNK6Q9Y257 313 aa20.84■□□□□ 0.93
VSX1-201ENST00000376707 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.83■□□□□ 0.93
VSX1-201ENST00000376707 DUX1O43812 170 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 SNX2O60749 519 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 ZNF569Q5MCW4 686 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.83■□□□□ 0.93
VSX1-201ENST00000376707 NPNTQ6UXI9 565 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 NT5DC3Q86UY8 548 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 ART4Q93070 314 aa20.83■□□□□ 0.93
VSX1-201ENST00000376707 RNF25Q96BH1 459 aaPredicted RBP20.83■□□□□ 0.93
VSX1-201ENST00000376707 IMP4Q96G21 291 aaKnown RBP20.83■□□□□ 0.93
VSX1-201ENST00000376707 ARHGAP9Q9BRR9 750 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms