RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 SCAMP4Q969E2 229 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 KIAA1143Q96AT1 154 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-204ENST00000376643 CATSPER2Q96P56 530 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 FUCA2Q9BTY2 467 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 MAK16Q9BXY0 300 aaKnown RBP14.64□□□□□ -0.07
HDAC6-204ENST00000376643 SEMA4CQ9C0C4 833 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 BRD8Q9H0E9 1235 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 CARD9Q9H257 536 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 ADNPQ9H2P0 1102 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 CBX8Q9HC52 389 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 SLC39A1Q9NY26 324 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 ZNHIT2Q9UHR6 403 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 TMEM98Q9Y2Y6 226 aa14.64□□□□□ -0.07
HDAC6-204ENST00000376643 ARHGEF17Q96PE2 2063 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-204ENST00000376643 ANKRD66B4E2M5 251 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 PPP1R12AO14974 1030 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-204ENST00000376643 PPM1DO15297 605 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 INPP4BO15327 924 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 PPFIA2O75334 1257 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 MTA2O94776 668 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 CD48P09326 243 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 HNRNPH3P31942 346 aaKnown RBP14.63□□□□□ -0.07
HDAC6-204ENST00000376643 SPINT3P49223 89 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 NFATC3Q12968 1075 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 SLC18A3Q16572 532 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 ZNF569Q5MCW4 686 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 CCDC70Q6NSX1 233 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 CEACAM20Q6UY09 585 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 LYSMD3Q7Z3D4 306 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 LUZP1Q86V48 1076 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 FAM129CQ86XR2 697 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 SFTPA2Q8IWL1 248 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 RCBTB1Q8NDN9 531 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 ARRDC2Q8TBH0 407 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 SLC37A2Q8TED4 501 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 XPO4Q9C0E2 1151 aaKnown RBP14.63□□□□□ -0.07
HDAC6-204ENST00000376643 TRIT1Q9H3H1 467 aaKnown RBP14.63□□□□□ -0.07
HDAC6-204ENST00000376643 CLMPQ9H6B4 373 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 PDP2Q9P2J9 529 aa14.63□□□□□ -0.07
HDAC6-204ENST00000376643 SCN8AQ9UQD0 1980 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 SSU72P8A0A1W2PR75 194 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CBFA2T2O43439 604 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CLDN7O95471 211 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 GYPCP04921 128 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 HLA-DQB2P05538 268 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 FGF3P11487 239 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CCL4P13236 92 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 F3P13726 295 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 ARHGAP25P42331 645 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 TNNT3P45378 269 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CLCNKAP51800 687 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 DCDC1P59894 354 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 IFI35P80217 286 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 KCNC4Q03721 635 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 PPIDQ08752 370 aaKnown RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 PDK1Q15118 436 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 SLC14A2Q15849 920 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 HENMT1Q5T8I9 393 aaKnown RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CYB5D1Q6P9G0 228 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 ZNF574Q6ZN55 896 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 ATG14Q6ZNE5 492 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 BZW1Q7L1Q6 419 aaKnown RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 CHST15Q7LFX5 561 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 PRICKLE2Q7Z3G6 844 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 VASH2Q86V25 355 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 PATE1Q8WXA2 126 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 EXTL1Q92935 676 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 ART4Q93070 314 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 ZSCAN5AQ9BUG6 496 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 STARD5Q9NSY2 213 aa14.62□□□□□ -0.07
HDAC6-204ENST00000376643 NFKBIL1Q9UBC1 381 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-204ENST00000376643 SYCE3A1L190 88 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 LRRD1A4D1F6 860 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 EFCAB7A8K855 629 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 ZNF891A8MT65 544 aaPredicted RBP14.61□□□□□ -0.07
HDAC6-204ENST00000376643 DNAJC6O75061 913 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 MAP3K6O95382 1288 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 TMEM253P0C7T8 217 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 MAP4P27816 1152 aaKnown RBP14.61□□□□□ -0.07
HDAC6-204ENST00000376643 CSF2RBP32927 897 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 CD86P42081 329 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 MC1RQ01726 317 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 GBE1Q04446 702 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 LINC00303Q3SY05 128 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 NKAIN2Q5VXU1 208 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 BORAQ6PGQ7 559 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 IYDQ6PHW0 289 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 TRIM74Q86UV6 250 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 PLXDC1Q8IUK5 500 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 RHOT2Q8IXI1 618 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 CACNA2D3Q8IZS8 1091 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC6-204ENST00000376643 NKD1Q969G9 470 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 RNF157Q96PX1 679 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 UCK1Q9HA47 277 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 ZFYVE1Q9HBF4 777 aa14.61□□□□□ -0.07
HDAC6-204ENST00000376643 GEMIN8Q9NWZ8 242 aaKnown RBP14.61□□□□□ -0.07
HDAC6-204ENST00000376643 DTLQ9NZJ0 730 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms