RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 NTHL1P78549 312 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 CAP1Q01518 475 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 GK3PQ14409 553 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 ATG14Q6ZNE5 492 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 GCNT7Q6ZNI0 430 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 TRIM74Q86UV6 250 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
DDR1-227ENST00000376570 PCYOX1LQ8NBM8 494 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
DDR1-227ENST00000376570 C19orf60Q96EN9 201 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 ZBTB18Q99592 522 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 DHRS4Q9BTZ2 278 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 BOCQ9BWV1 1114 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 PRKD2Q9BZL6 878 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 RNF38Q9H0F5 515 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 SMOC2Q9H3U7 446 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 ABCB8Q9NUT2 735 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 ADAMTS6Q9UKP5 1117 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 PTGES3LE9PB15 166 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 HAS3O00219 553 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 CXCL14O95715 111 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 SNRPB2P08579 225 aaKnown RBP11.62□□□□□ -0.55
DDR1-227ENST00000376570 HIST1H2AGP0C0S8 130 aaPredicted RBP11.62□□□□□ -0.55
DDR1-227ENST00000376570 CSF2RAP15509 400 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 VCLP18206 1134 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 HIST1H2ADP20671 130 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 TAZQ16635 292 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 SYTL3Q4VX76 610 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 IL23RQ5VWK5 629 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 CCDC81Q6ZN84 652 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 MFSD6LQ8IWD5 586 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 RIN3Q8TB24 985 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 KLK6Q92876 244 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 SH3KBP1Q96B97 665 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 RNF31Q96EP0 1072 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 HIST1H2AHQ96KK5 128 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 HIST1H2AJQ99878 128 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 HAUS8Q9BT25 410 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 H2AFJQ9BTM1 129 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 OSGEPL1Q9H4B0 414 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 EXD2Q9NVH0 621 aa11.62□□□□□ -0.55
DDR1-227ENST00000376570 TDRKHQ9Y2W6 561 aaKnown RBP11.62□□□□□ -0.55
DDR1-227ENST00000376570 GBAP04062 536 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 IL10P22301 178 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 TUFMP49411 452 aaKnown RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 TRAF2Q12933 501 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 EGFL6Q8IUX8 553 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 PIANPQ8IYJ0 282 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 SDCCAG3Q96C92 435 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 LRCH3Q96II8 777 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 ZFYVE19Q96K21 471 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 GPR22Q99680 433 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 EBPLQ9BY08 206 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 AKTIPQ9H8T0 292 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 USP3Q9Y6I4 520 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 SMAD6O43541 496 aaKnown RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 TSHRP16473 764 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 CLCN5P51795 746 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 RD3Q7Z3Z2 195 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 STK32CQ86UX6 486 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 ZNF398Q8TD17 642 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 FAM162AQ96A26 154 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 TNFRSF12AQ9NP84 129 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 LIMD1Q9UGP4 676 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 SLCO3A1Q9UIG8 710 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 TLR6Q9Y2C9 796 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 A0A088AWK7 358 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 C15orf38-AP3S2A0A0A6YYH1 394 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 A6NHS1 94 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 TGDSO95455 350 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 NDST3O95803 873 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 CAPN1P07384 714 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 DHRS4L1P0CG22 281 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 ITGALP20701 1170 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 ADSLP30566 484 aaPredicted RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 NNMTP40261 264 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 MS4A2Q01362 244 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 SF1Q15637 639 aaKnown RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 CRY1Q16526 586 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 HSF5Q4G112 596 aaPredicted RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 RFLNAQ6ZTI6 216 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 NET1Q7Z628 596 aaPredicted RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 ARPINQ7Z6K5 226 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 SCAMP4Q969E2 229 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 CCDC106Q9BWC9 280 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 RUBCNLQ9H714 662 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 PREBQ9HCU5 417 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 HCFC1R1Q9NWW0 138 aa11.61□□□□□ -0.55
DDR1-227ENST00000376570 RANBP2P49792 3224 aaKnown RBP11.61□□□□□ -0.55
DDR1-227ENST00000376570 TRBV23OR9-2A0A075B6M9 112 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 CCDC154A6NI56 674 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 HHLA1C9JL84 531 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 SAP18O00422 153 aaKnown RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 PLK4O00444 970 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 CYP4B1P13584 511 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 C16orf72Q14CZ0 275 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 TRIP4Q15650 581 aaPredicted RBP11.6□□□□□ -0.55
DDR1-227ENST00000376570 GALNT10Q86SR1 603 aa11.6□□□□□ -0.55
DDR1-227ENST00000376570 APCDD1Q8J025 514 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms