RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 NOL11Q9H8H0 719 aaKnown RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 RHBDL2Q9NX52 303 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 ZNF232Q9UNY5 417 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 KRT75O95678 551 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 VAV1P15498 845 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 ST13P50502 369 aaKnown RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 PRMT2P55345 433 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TAS1R3Q7RTX0 852 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 OSTM1Q86WC4 334 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TSPAN14Q8NG11 270 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 MRPL48Q96GC5 212 aaKnown RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 OSBPL2Q9H1P3 480 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 SLC28A3Q9HAS3 691 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 LRTM1Q9HBL6 345 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 CNTN6Q9UQ52 1028 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 CAB39Q9Y376 341 aaPredicted RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 ATXN2Q99700 1313 aaKnown RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3DA0A087WVF3 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3IA0A087WXS9 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3EA0A087X179 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3KA0A087X1G2 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3FA6NER0 549 aaPredicted RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 A8MUI8 341 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3LB9A6J9 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3HP0C7X1 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 NR2F1P10589 423 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3GQ6DHY5 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3CQ6IPX1 549 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 BHLHB9Q6PI77 547 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TBC1D3Q8IZP1 549 aaPredicted RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 IMP3Q9NV31 184 aaKnown RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 PSMD13Q9UNM6 376 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 ANGPT4Q9Y264 503 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 LRP6O75581 1613 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 ATG13O75143 517 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 NFATC1O95644 943 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 DNTTP04053 509 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 MYL12AP19105 171 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 USP39Q53GS9 565 aaKnown RBP13.56□□□□□ -0.24
C9orf47-203ENST00000375851 SERPINA9Q86WD7 417 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 C17orf64Q86WR6 236 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 GATAD2AQ86YP4 633 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 CPNE9Q8IYJ1 553 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 FERD3LQ96RJ6 166 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 GKN1Q9NS71 199 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 SRRDQ9UH36 339 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 CORO2BQ9UQ03 480 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
C9orf47-203ENST00000375851 IQCF5A8MTL0 148 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 CACNB4O00305 520 aaPredicted RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 RGS20O76081 388 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 WASP42768 502 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 TLE2Q04725 743 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 RALGDSQ12967 914 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 NAE1Q13564 534 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 TSNQ15631 228 aaKnown RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 LSM12Q3MHD2 195 aaKnown RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 TMEM63BQ5T3F8 832 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 FBXL22Q6P050 247 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 TRIM40Q6P9F5 258 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 TCAIMQ8N3R3 496 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 KREMEN2Q8NCW0 462 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 REXO5Q96IC2 774 aaKnown RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 HBEGFQ99075 208 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 VPS4AQ9UN37 437 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 ZNF142P52746 1687 aaPredicted RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 OR2AG2A6NM03 316 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SNAP91O60641 907 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 NUDT14O95848 222 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 ESR1P03372 595 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SLC1A2P43004 574 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 CCR4P51679 360 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 RIPK1Q13546 671 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 ATXN7L2Q5T6C5 722 aaPredicted RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 PIGWQ7Z7B1 504 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SLC27A6Q9Y2P4 619 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SAMHD1Q9Y3Z3 626 aaKnown RBP13.55□□□□□ -0.24
C9orf47-203ENST00000375851 AP4B1Q9Y6B7 739 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 UBXN8O00124 270 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 ARVCFO00192 962 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 HCAR3P49019 387 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SLC20A2Q08357 652 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SLC10A7Q0GE19 358 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 C16orf72Q14CZ0 275 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 VPS26BQ4G0F5 336 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 IL23RQ5VWK5 629 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 OR8H2Q8N162 312 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 RNFT2Q96EX2 444 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 SGK2Q9HBY8 427 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 AASDHPPTQ9NRN7 309 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 GMPPBQ9Y5P6 360 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 DYTNA2CJ06 578 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 WFS1O76024 890 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 PRNPP04156 253 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 EPHX1P07099 455 aa13.55□□□□□ -0.24
C9orf47-203ENST00000375851 PTPN2P17706 415 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms