RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PLOD3O60568 738 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 FEN1P39748 380 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 AP3D1O14617 1153 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 IFNW1P05000 195 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 YBX3P16989 372 aaKnown RBP eCLIP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 MAB21L1Q13394 359 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 SUZ12Q15022 739 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 KIAA0930Q6ICG6 404 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 C7orf43Q8WVR3 580 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 SNRNP25Q9BV90 132 aaKnown RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 MLXQ9UH92 298 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 SLIT2O94813 1529 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 EFCAB9A8MZ26 197 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ABCB7O75027 752 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ALDH3A2P51648 485 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 YBEYP58557 167 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 C15orf59Q2T9L4 293 aaPredicted RBP10.15□□□□□ -0.78
PTCH1-204ENST00000375290 LRRC20Q8TCA0 184 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 ITPAQ9BY32 194 aa10.15□□□□□ -0.78
PTCH1-204ENST00000375290 SLC7A4O43246 635 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 CYP11A1P05108 521 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 ARFIP1P53367 373 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 IRF8Q02556 426 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 HACD2Q6Y1H2 254 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 ACSF2Q96CM8 615 aaPredicted RBP10.15□□□□□ -0.79
PTCH1-204ENST00000375290 C8orf48Q96LL4 319 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 TMEM138Q9NPI0 162 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 MAFO75444 373 aaPredicted RBP10.15□□□□□ -0.79
PTCH1-204ENST00000375290 SLC18A2Q05940 514 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 SEMA5AQ13591 1074 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 SWI5Q1ZZU3 235 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 OVOS1Q6IE37 1185 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 OAFQ86UD1 273 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 OR52K1Q8NGK4 314 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 YME1L1Q96TA2 773 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 HSD3B7Q9H2F3 369 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 SLC17A7Q9P2U7 560 aa10.15□□□□□ -0.79
PTCH1-204ENST00000375290 PHRF1Q9P1Y6 1649 aaKnown RBP10.15□□□□□ -0.79
PTCH1-204ENST00000375290 KHDRBS3O75525 346 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 AGR2O95994 175 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 FGFR3P22607 806 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CD40LGP29965 261 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 DSG3P32926 999 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SCNN1BP51168 640 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TAPT1Q6NXT6 567 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 YAF2Q8IY57 180 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ANKRD49Q8WVL7 239 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 GPN3Q9UHW5 284 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SEMA3AQ14563 771 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 RALGPS1Q5JS13 557 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF697Q5TEC3 545 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 LPCAT4Q643R3 524 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TRPV3Q8NET8 790 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 FKBP10Q96AY3 582 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 LENG8Q96PV6 779 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 BBS4Q96RK4 519 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 MRTO4Q9UKD2 239 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 UBIAD1Q9Y5Z9 338 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 PLOD2O00469 737 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 OR10H3O60404 316 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ACSL1P33121 698 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ERVK-8P63133 956 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SULT1C3Q6IMI6 304 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 MTSS1LQ765P7 747 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 BEND5Q7L4P6 421 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 DEFB106AQ8N104 65 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TAAR1Q96RJ0 339 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SEPT5Q99719 369 aaPredicted RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TKTL2Q9H0I9 626 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 MRM3Q9HC36 420 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CHRNA5P30532 468 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TGFB2P61812 414 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 LIPEQ05469 1076 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 NADK2Q4G0N4 442 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TMC8Q8IU68 726 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SLC16A10Q8TF71 515 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 NTPCRQ9BSD7 190 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 GPRC5CQ9NQ84 441 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 GRXCR2A6NFK2 248 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 SERPIND1P05546 499 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CPTPQ5TA50 214 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 MND1Q9BWT6 205 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 NRCAMQ92823 1304 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 HCAR3P49019 387 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ACOX1Q15067 660 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CYP20A1Q6UW02 462 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 POP1Q99575 1024 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ANKDD1BA6NHY2 528 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 IDH3AP50213 366 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 TAS2R43P59537 309 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 MRPS5P82675 430 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 EARS2Q5JPH6 523 aaKnown RBP10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ZNF767PQ75MW2 155 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 STYXQ8WUJ0 223 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 CPB2Q96IY4 423 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 COPS4Q9BT78 406 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 DUSP16Q9BY84 665 aa10.14□□□□□ -0.79
PTCH1-204ENST00000375290 ATP13A3Q9H7F0 1226 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms