RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 HOXD9P28356 352 aaPredicted RBP12.17□□□□□ -0.46
UBR4-203ENST00000375225 OR1D2P34982 312 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 SCNN1BP51168 640 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 CLCN4P51793 760 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 PGGT1BP53609 377 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 FOLH1Q04609 750 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 BNIP2Q12982 314 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 GRM2Q14416 872 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 ADRM1Q16186 407 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 TPGS2Q68CL5 300 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 RSPO2Q6UXX9 243 aaPredicted RBP12.17□□□□□ -0.46
UBR4-203ENST00000375225 OR13C4Q8NGS5 318 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 TWIST2Q8WVJ9 160 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 EXT2Q93063 718 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 MOCOSQ96EN8 888 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
UBR4-203ENST00000375225 ACSS2Q9NR19 701 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 MRPL17Q9NRX2 175 aaKnown RBP12.17□□□□□ -0.46
UBR4-203ENST00000375225 RIC8BQ9NVN3 520 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 PLK2Q9NYY3 685 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 AFF4Q9UHB7 1163 aaKnown RBP12.17□□□□□ -0.46
UBR4-203ENST00000375225 PCDHGA7Q9Y5G6 932 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
UBR4-203ENST00000375225 SMIM31A0A1B0GVY4 71 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 OR51F1A6NGY5 319 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ACOT8O14734 319 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 STX7O15400 261 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 SORBS2O94875 1100 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 TNFAIP8O95379 198 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 MATN4O95460 622 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 S100BP04271 92 aaPredicted RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 SYN1P17600 705 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 MRPL19P49406 292 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 RHDQ02161 417 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 INPP5AQ14642 412 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 PFKFB4Q16877 469 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 KANK2Q63ZY3 851 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ZNF549Q6P9A3 640 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TMEM207Q6UWW9 146 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 LDB1Q86U70 411 aaPredicted RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 PIM3Q86V86 326 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 DDIASQ8IXT1 998 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 EFCAB3Q8N7B9 438 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 OR7D4Q8NG98 312 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 OR4K2Q8NGD2 314 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 OR56A4Q8NGH8 313 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 LPGAT1Q92604 370 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 PTERQ96BW5 349 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ZFRQ96KR1 1074 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 ATOH8Q96SQ7 321 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 RAD9AQ99638 391 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 C19orf43Q9BQ61 176 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TDRD1Q9BXT4 1180 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 MUC3BQ9H195 1237 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 SUDS3Q9H7L9 328 aaPredicted RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 COPS7BQ9H9Q2 264 aaPredicted RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 C8orf4Q9NR00 106 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 RIMS3Q9UJD0 308 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 RWDD3Q9Y3V2 267 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 AP4S1Q9Y587 144 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 KCTD3Q9Y597 815 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 PCDHB1Q9Y5F3 818 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 A0A0J9YYE9 177 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 E5RI56 91 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 UBXN8O00124 270 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TRIM24O15164 1050 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TLL1O43897 1013 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 FGF18O76093 207 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ZCCHC18P0CG32 403 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 UROSP10746 265 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 PKMP14618 531 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 RPL17P18621 184 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 SLC7A1P30825 629 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CORO1AP31146 461 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 FMO4P31512 558 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 PTGER3P43115 390 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 KCNQ1P51787 676 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ADARP55265 1226 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 IL2P60568 153 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CLCQ05315 142 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ADGRF1Q5T601 910 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CERS6Q6ZMG9 384 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 METTL3Q86U44 580 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 DHFR2Q86XF0 187 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 DENND1CQ8IV53 801 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 LPCAT1Q8NF37 534 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 ZNF461Q8TAF7 563 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 DDI1Q8WTU0 396 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CLP1Q92989 425 aaKnown RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 ZUFSPQ96AP4 578 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TUBGCP3Q96CW5 907 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 TUBGCP5Q96RT8 1024 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CLSTN3Q9BQT9 956 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 C1QTNF3Q9BXJ4 246 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 AKTIPQ9H8T0 292 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 VCX3AQ9NNX9 186 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 CXXC1Q9P0U4 656 aaPredicted RBP12.16□□□□□ -0.46
UBR4-203ENST00000375225 TMEM181Q9P2C4 612 aa12.16□□□□□ -0.46
UBR4-203ENST00000375225 MAFFQ9ULX9 164 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms