RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 HDCP19113 662 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 POLR2EP19388 210 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 PPARGP37231 505 aaPredicted RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 ACADVLP49748 655 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 EIF2B2P49770 351 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 PGGT1BP53609 377 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 CDKN2DP55273 166 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 ACSBG2Q5FVE4 666 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 WDR45BQ5MNZ6 344 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 KDM1BQ8NB78 822 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 LPCAT1Q8NF37 534 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 ACTRT2Q8TDY3 377 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 L3HYPDHQ96EM0 354 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 MAELQ96JY0 434 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 NSMCE3Q96MG7 304 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 OR52B2Q96RD2 323 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 NUF2Q9BZD4 464 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 TFB2MQ9H5Q4 396 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 PALMDQ9NP74 551 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 TIMMDC1Q9NPL8 285 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 MAN1C1Q9NR34 630 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 DDX18Q9NVP1 670 aaKnown RBP8.18□□□□□ -1.1
UBR4-202ENST00000375224 FAIMQ9NVQ4 179 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 VPS28Q9UK41 221 aa8.18□□□□□ -1.1
UBR4-202ENST00000375224 GOLGA8CPA6NN73 597 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CCL22O00626 93 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FBP2O00757 339 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FKBP6O75344 327 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 GJB3O75712 270 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 BAIAP3O94812 1187 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 OLFM2O95897 454 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SLC4A1P02730 911 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 PFKLP17858 780 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 MAPK8P45983 427 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 RGRP47804 291 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 TTPAP49638 278 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 MNX1P50219 401 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 SGSHP51688 502 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ATP6V0D1P61421 351 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ARF5P84085 180 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CDH18Q13634 790 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ZNF362Q5T0B9 420 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 GPR158Q5T848 1215 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 NXNQ6DKJ4 435 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 RETSATQ6NUM9 610 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 NCEH1Q6PIU2 408 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 C16orf89Q6UX73 402 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 LDB1Q86U70 411 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 ELMOD1Q8N336 334 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 OR4K2Q8NGD2 314 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 VMP1Q96GC9 406 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ZNF304Q9HCX3 659 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SMPD4Q9NXE4 827 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 STX18Q9P2W9 335 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 NOTOA8MTQ0 251 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 NEMP1O14524 444 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 STX7O15400 261 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 B3GALNT1O75752 331 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 RHOBTB1O94844 696 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 KRT75O95678 551 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 TIMP1P01033 207 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 PIRTP0C851 137 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CD1DP15813 335 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CD9P21926 228 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ACTR3P61158 418 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 RHOAP61586 193 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 AP1S1P61966 158 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 AP2B1P63010 937 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SLC34A1Q06495 639 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 RAD51Q06609 339 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SPIDRQ14159 915 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 C1orf146Q5VVC0 180 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FAM117BQ6P1L5 589 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CCDC149Q6ZUS6 474 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FRMD7Q6ZUT3 714 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ISCA2Q86U28 154 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FAM217AQ8IXS0 508 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 NKAPQ8N5F7 415 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 POU5F2Q8N7G0 328 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 DCAF4L2Q8NA75 395 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■■■■■ 62.8
UBR4-202ENST00000375224 ZNF333Q96JL9 665 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ZFRQ96KR1 1074 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 SERPINI1Q99574 410 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 C19orf43Q9BQ61 176 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 FEM1AQ9BSK4 669 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ALG9Q9H6U8 611 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SELENONQ9NZV5 590 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 PLXNA4Q9HCM2 1894 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 ANKRD36A6QL64 1941 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 LINC00854A0A1B0GVQ3 168 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 SMIM31A0A1B0GVY4 71 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 UBA6A0AVT1 1052 aaPredicted RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 BUD23O43709 281 aaKnown RBP8.17□□□□□ -1.1
UBR4-202ENST00000375224 ZBTB14O43829 449 aa8.17□□□□□ -1.1
UBR4-202ENST00000375224 CCNT2O60583 730 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms