RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TMEM134Q9H6X4 195 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 SMURF2Q9HAU4 748 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 SLC1A7O00341 560 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 HUS1O60921 280 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 TSPAN8P19075 237 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 ATP5F1P24539 256 aaPredicted RBP20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 POLD2P49005 469 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 GRM1Q13255 1194 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 SMU1Q2TAY7 513 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 CATSPERGQ6ZRH7 1159 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 SLC26A9Q7LBE3 791 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 P2RY8Q86VZ1 359 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 GRAMD2AQ8IUY3 354 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 MFSD6LQ8IWD5 586 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 TMEM125Q96AQ2 219 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 KCTD14Q9BQ13 255 aaPredicted RBP20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 BCL7BQ9BQE9 202 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 AMBRA1Q9C0C7 1298 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 PIF1Q9H611 641 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 TRIM39Q9HCM9 518 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 CCDC177Q9NQR7 707 aaPredicted RBP20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 PLSCR3Q9NRY6 295 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 NAALAD2Q9Y3Q0 740 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 BPTFQ12830 3046 aa20.5■□□□□ 0.87
TMEFF1-201ENST00000374879 CILPO75339 1184 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 PTTG1O95997 202 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 UMPSP11172 480 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 PCNAP12004 261 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 MAP2K4P45985 399 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 DNAJB13P59910 316 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 LIPEQ05469 1076 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 MAP1SQ66K74 1059 aaPredicted RBP20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 GDPD3Q7L5L3 318 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 CDR2LQ86X02 465 aaPredicted RBP20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 CCDC185Q8N715 623 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 BEST2Q8NFU1 509 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 MCFD2Q8NI22 146 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 BPIFB1Q8TDL5 484 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 HEXDCQ8WVB3 486 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 YIPF6Q96EC8 236 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 SIP14410 1827 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 KCNK1O00180 336 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 KPNA6O60684 536 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 SNX2O60749 519 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 GMPSP49915 693 aaPredicted RBP20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 ATP4BP51164 291 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 TTC23Q5W5X9 447 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 ANKRD34AQ69YU3 496 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 TP53INP2Q8IXH6 220 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 METTL4Q8N3J2 472 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 RORBQ92753 470 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 RPL3LQ92901 407 aaKnown RBP20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 AURKBQ96GD4 344 aaPredicted RBP20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 MBOAT4Q96T53 435 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 EML4Q9HC35 981 aaKnown RBP20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF112Q9UJU3 913 aa20.49■□□□□ 0.87
TMEFF1-201ENST00000374879 ANKRD12Q6UB98 2062 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 XPNPEP2O43895 674 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 TBC1D4O60343 1298 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 TNNC2P02585 160 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 PFKMP08237 780 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 ICAM3P32942 547 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 RAB10P61026 200 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 DGCR6Q14129 220 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 FAM83EQ2M2I3 478 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 ZNF280DQ6N043 979 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 ANGPTL6Q8NI99 470 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 PROX1Q92786 737 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 AKTIPQ9H8T0 292 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 PIM2Q9P1W9 311 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 C19orf81C9J6K1 198 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 ERVH48-1M5A8F1 160 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 CDK2AP1O14519 115 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 UBFD1O14562 309 aaKnown RBP20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 NOBOXO60393 691 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 MYL3P08590 195 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 RPS12P25398 132 aaKnown RBP20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 BEND5Q7L4P6 421 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 PTRH1Q86Y79 214 aaKnown RBP20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 GALNT12Q8IXK2 581 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 RIMKLAQ8IXN7 391 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 PCYT2Q99447 389 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 MRPL57Q9BQC6 102 aaKnown RBP20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 TSPAN16Q9UKR8 245 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 CAB39Q9Y376 341 aaPredicted RBP20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 GJA3Q9Y6H8 435 aa20.48■□□□□ 0.87
TMEFF1-201ENST00000374879 PCM1Q15154 2024 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PDZK1P1A8MUH7 402 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 EVPLLA8MZ36 301 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 NDST3O95803 873 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 ACVR2AP27037 513 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 TXNDC11Q6PKC3 985 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PSTKQ8IV42 348 aaKnown RBP20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PHF21BQ96EK2 531 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 DMRTB1Q96MA1 342 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 B3GNT5Q9BYG0 378 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 PLEKHA5Q9HAU0 1116 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 GIMAP4Q9NUV9 329 aa20.47■□□□□ 0.87
TMEFF1-201ENST00000374879 IGKV6D-21A0A0A0MT36 114 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms