RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SYTL2Q9HCH5 934 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 TAS2R13Q9NYV9 303 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 CD207Q9UJ71 328 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 FAM50BQ9Y247 325 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 LRCH1Q9Y2L9 728 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 MTF2Q9Y483 593 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-202ENST00000374487 RAI2Q9Y5P3 530 aa12.05□□□□□ -0.48
HMGCL-202ENST00000374487 GREB1Q4ZG55 1949 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 UBDO15205 165 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 PFDN6O15212 129 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 SRP72O76094 671 aaKnown RBP12.04□□□□□ -0.48
HMGCL-202ENST00000374487 PRSS56P0CW18 603 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 MBL2P11226 248 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-202ENST00000374487 CR2P20023 1033 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 LPOP22079 712 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-202ENST00000374487 PPP3CCP48454 512 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 GEN1Q17RS7 908 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 TYSND1Q2T9J0 566 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 LILRA6Q6PI73 481 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 TMEM184AQ6ZMB5 413 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 BNC2Q6ZN30 1099 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-202ENST00000374487 CARNMT1Q8N4J0 409 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 SMRP1Q8NCR6 262 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 MDGA1Q8NFP4 955 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 NSMCE3Q96MG7 304 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 COL25A1Q9BXS0 654 aaPredicted RBP12.04□□□□□ -0.48
HMGCL-202ENST00000374487 GSTO2Q9H4Y5 243 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 MEAF6Q9HAF1 191 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 TRPC7Q9HCX4 862 aa12.04□□□□□ -0.48
HMGCL-202ENST00000374487 FNDC3AQ9Y2H6 1198 aaKnown RBP12.04□□□□□ -0.48
HMGCL-202ENST00000374487 TYW5A2RUC4 315 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 EIF4E1BA6NMX2 242 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 ANKRD66B4E2M5 251 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 SCAMP3O14828 347 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 PRLP01236 227 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 GFAPP14136 432 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 ABL2P42684 1182 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 SUOXP51687 545 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 KLC1Q07866 573 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TWF1Q12792 350 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 PFKFB4Q16877 469 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 CLEC6AQ6EIG7 209 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 DNAJB7Q7Z6W7 309 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 PTGR2Q8N8N7 351 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 ADAMTS19Q8TE59 1207 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TRMT2BQ96GJ1 504 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 CYP2S1Q96SQ9 504 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TCF12Q99081 682 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 MRPL1Q9BYD6 325 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 WDR41Q9HAD4 459 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TNFRSF12AQ9NP84 129 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 STK39Q9UEW8 545 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 UBXN8O00124 270 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 UBFD1O14562 309 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 SNAP91O60641 907 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TBL1XO60907 577 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TMCC1O94876 653 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 GLUD1P00367 558 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 ADH1AP07327 375 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 CDH13P55290 713 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 NFKB2Q00653 900 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TIAL1Q01085 375 aaKnown RBP eCLIP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 RAD51Q06609 339 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 STX5Q13190 355 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 BLMHQ13867 455 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 EML3Q32P44 896 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 MMEL1Q495T6 779 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 ANO7Q6IWH7 933 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 CXorf57Q6NSI4 855 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 ADGRG6Q86SQ4 1221 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 PGAM4Q8N0Y7 254 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 PELI3Q8N2H9 469 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 RHEBL1Q8TAI7 183 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 STAG3L4Q8TBR4 150 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 WBP2Q969T9 261 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 TFB2MQ9H5Q4 396 aaKnown RBP12.03□□□□□ -0.48
HMGCL-202ENST00000374487 VPS28Q9UK41 221 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 VPS9D1Q9Y2B5 631 aa12.03□□□□□ -0.48
HMGCL-202ENST00000374487 CARNS1A5YM72 827 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 LIN7AO14910 233 aaPredicted RBP12.02□□□□□ -0.48
HMGCL-202ENST00000374487 STX7O15400 261 aaKnown RBP12.02□□□□□ -0.48
HMGCL-202ENST00000374487 EPHB3P54753 998 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 ARF5P84085 180 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 MAPRE2Q15555 327 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 OR4D1Q15615 310 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 PTPRNQ16849 979 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 UNC50Q53HI1 259 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 PAQR3Q6TCH7 311 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 IZUMO2Q6UXV1 221 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 CLYBLQ8N0X4 340 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 KREMEN2Q8NCW0 462 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 LPGAT1Q92604 370 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.48
HMGCL-202ENST00000374487 SMIM14Q96QK8 99 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 NPAS2Q99743 824 aa12.02□□□□□ -0.48
HMGCL-202ENST00000374487 POLR3BQ9NW08 1133 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms