RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 ZCWPW1Q9H0M4 648 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 MAGEH1Q9H213 219 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 TLR8Q9NR97 1041 aaKnown RBP10.84□□□□□ -0.67
LCN2-202ENST00000372998 RNF19AQ9NV58 838 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 MAP10Q9P2G4 905 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 ZNF639Q9UID6 485 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 PCDHB5Q9Y5E4 795 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 PCDHB3Q9Y5E6 796 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 FADS3Q9Y5Q0 445 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 GPR45Q9Y5Y3 372 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 TRPM7Q96QT4 1865 aa10.84□□□□□ -0.67
LCN2-202ENST00000372998 A0A1W2PQH9 124 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 SAC3D1A6NKF1 404 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 SOCS2O14508 198 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 UBFD1O14562 309 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 SYN3O14994 580 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 PRAMEF11O60813 436 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 OAZ2O95190 189 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 MOCS2O96007 188 aaPredicted RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 GOT2P00505 430 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 MMP2P08253 660 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ATXN1LP0C7T5 689 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 ATP6V1B2P21281 511 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 YWHAQP27348 245 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 HLCSP50747 726 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 CLCN4P51793 760 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 POLR2JP52435 117 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 PLK1P53350 603 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ATXN3P54252 364 aaPredicted RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 SH3BP2P78314 561 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 EMX2Q04743 252 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 TAF1AQ15573 450 aaPredicted RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 CRY1Q16526 586 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 PPP1R3AQ16821 1122 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 PFKFB4Q16877 469 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ZNF829Q3KNS6 432 aaPredicted RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 FAM98BQ52LJ0 330 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 MS4A13Q5J8X5 152 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 CLEC6AQ6EIG7 209 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 TTC23LQ6PF05 361 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 LAYNQ6UX15 382 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 NEK10Q6ZWH5 1172 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ZNF554Q86TJ5 538 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 CLVS1Q8IUQ0 354 aaPredicted RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 PHYKPLQ8IUZ5 450 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ZNF683Q8IZ20 524 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 SFRP1Q8N474 314 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ARRDC2Q8TBH0 407 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 FNDC8Q8TC99 324 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ANKRD49Q8WVL7 239 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ITFG2Q969R8 447 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ISOC1Q96CN7 298 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 AURKBQ96GD4 344 aaPredicted RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 NSMCE2Q96MF7 247 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 ZNF382Q96SR6 550 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 NOL6Q9H6R4 1146 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 IL37Q9NZH6 218 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 NUDT4Q9NZJ9 180 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 SFMBT1Q9UHJ3 866 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 TRMT6Q9UJA5 497 aaKnown RBP10.83□□□□□ -0.68
LCN2-202ENST00000372998 ZNF711Q9Y462 761 aa10.83□□□□□ -0.68
LCN2-202ENST00000372998 EP400Q96L91 3159 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 A0A0J9YVX5 310 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 FAM92AA1XBS5 289 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 CCDC162PA2VCL2 907 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 OR6C75A6NL08 312 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 INPP4BO15327 924 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 ARHGEF15O94989 841 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 EOMESO95936 686 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 SLC4A1P02730 911 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 RAP2AP10114 183 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 IMPDH2P12268 514 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 CAPN3P20807 821 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 EEF1DP29692 281 aaKnown RBP10.82□□□□□ -0.68
LCN2-202ENST00000372998 GSK3BP49841 420 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 GABARAPL2P60520 117 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 IL2P60568 153 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 NKX3-2P78367 333 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 DSC2Q02487 901 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 LIPEQ05469 1076 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 MGAT3Q09327 533 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 SLC10A7Q0GE19 358 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 SFSWAPQ12872 951 aaKnown RBP10.82□□□□□ -0.68
LCN2-202ENST00000372998 DSC3Q14574 896 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 RFX4Q33E94 735 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 C5orf22Q49AR2 442 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 VPS26BQ4G0F5 336 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 ATP6AP1LQ52LC2 224 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 XKR7Q5GH72 579 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
LCN2-202ENST00000372998 PIK3R6Q5UE93 754 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 BROXQ5VW32 411 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 GPRIN3Q6ZVF9 776 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 SERINC5Q86VE9 423 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 SPPL2CQ8IUH8 684 aa10.82□□□□□ -0.68
LCN2-202ENST00000372998 SCN4BQ8IWT1 228 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms