RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KLHL4Q9C0H6 718 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 PDFQ9HBH1 243 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 MRM3Q9HC36 420 aaKnown RBP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 PCDHGB4Q9UN71 923 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 PCDHGB5Q9Y5G0 923 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF236Q9UL36 1845 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 FAM149AA5PLN7 773 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 SLCO1B7G3V0H7 640 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 NPHS1O60500 1241 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 FKTNO75072 461 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 URODP06132 367 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 ALDOCP09972 364 aaKnown RBP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 ATP6V1B1P15313 513 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 CCNG1P51959 295 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 RING1Q06587 406 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 REP15Q6BDI9 236 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 MTFMTQ96DP5 389 aaKnown RBP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 KLHL32Q96NJ5 620 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 YME1L1Q96TA2 773 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 EGFL8Q99944 293 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 AARSD1Q9BTE6 412 aaKnown RBP11.69□□□□□ -0.54
PDE6C-201ENST00000371447 HGH1Q9BTY7 390 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 CFAP97Q9P2B7 532 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 VPS51Q9UID3 782 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 PKP3Q9Y446 797 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 DTNAQ9Y4J8 743 aa11.69□□□□□ -0.54
PDE6C-201ENST00000371447 FAM92AA1XBS5 289 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 H3BNC9 293 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 AZIN1O14977 448 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 INPPL1O15357 1258 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 KDELR3O43731 214 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 PGM3O95394 542 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CLDN7O95471 211 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CSF2RAP15509 400 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 HERVK_113P63132 956 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 NRG1Q02297 640 aaPredicted RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 AAK1Q2M2I8 961 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 SLC22A9Q8IVM8 553 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 HMGCLL1Q8TB92 370 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 SPATA17Q96L03 361 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CORO1BQ9BR76 489 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 ERVK-6Q9BXR3 956 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 LATS2Q9NRM7 1088 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 HACD3Q9P035 362 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 STK39Q9UEW8 545 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CD84Q9UIB8 345 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 MYLKQ15746 1914 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 TYW5A2RUC4 315 aaKnown RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CCDC160A6NGH7 325 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 ZNF839A8K0R7 811 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 FBP2O00757 339 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 LINGO3P0C6S8 592 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 MTHFD2P13995 350 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 FDXRP22570 491 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CA5AP35218 305 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 KPNA1P52294 538 aaPredicted RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CLCQ05315 142 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 IL23RQ5VWK5 629 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CXorf57Q6NSI4 855 aaKnown RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CMTM8Q8IZV2 173 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 NAT16Q8N8M0 369 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 OR52B6Q8NGF0 335 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 SLC22A17Q8WUG5 538 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 PKP2Q99959 881 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 MGME1Q9BQP7 344 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 FEM1AQ9BSK4 669 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 ADGRE3Q9BY15 652 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 VCXQ9H320 206 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 IL37Q9NZH6 218 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 MTRRQ9UBK8 725 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CASP8AP2Q9UKL3 1982 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 EYSQ5T1H1 3165 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 A0A0J9YYE9 177 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 PRORSD1PA6NEY8 169 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 TPD52L2O43399 206 aaKnown RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 MTX2O75431 263 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 VPS26AO75436 327 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CAPN15O75808 1086 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 OR4F21O95013 312 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CTSOP43234 321 aaPredicted RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 MED21Q13503 144 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 C6orf52Q5T4I8 152 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 RFLNAQ6ZTI6 216 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 BBS7Q8IWZ6 715 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 STAG3L4Q8TBR4 150 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 LPGAT1Q92604 370 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 CCDC126Q96EE4 140 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 C17orf80Q9BSJ5 609 aa11.68□□□□□ -0.54
PDE6C-201ENST00000371447 TSEN34Q9BSV6 310 aaKnown RBP11.68□□□□□ -0.54
PDE6C-201ENST00000371447 GREB1Q4ZG55 1949 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 TEX28O15482 410 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 HOXA2O43364 376 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
PDE6C-201ENST00000371447 ZDHHC11BP0C7U3 371 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms