RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 PDSS2Q86YH6 399 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 HJURPQ8NCD3 748 aaPredicted RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 SH3RF2Q8TEC5 729 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 C19orf60Q96EN9 201 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 MARK4Q96L34 752 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 HERC2P3Q9BVR0 1158 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 SPATS2LQ9NUQ6 558 aaKnown RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 EPS15L1Q9UBC2 864 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 RNF112Q9ULX5 631 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 PCDHGC4Q9Y5F7 938 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 C2orf78A6NCI8 922 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 GOLGA8CPA6NN73 597 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 STX16O14662 325 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 AZIN1O14977 448 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 TMCC1O94876 653 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 CDK14O94921 469 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 MBL2P11226 248 aaPredicted RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 GFAPP14136 432 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 PKMP14618 531 aaKnown RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 PLD1Q13393 1074 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 PFKFB4Q16877 469 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 AGKQ53H12 422 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 CAPRIN2Q6IMN6 1127 aaKnown RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 UGT3A1Q6NUS8 523 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 TMEM154Q6P9G4 183 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 RNF111Q6ZNA4 994 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 DNAJB7Q7Z6W7 309 aaPredicted RBP13.09□□□□□ -0.31
ECM1-202ENST00000369047 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 STK40Q8N2I9 435 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 GDPD5Q8WTR4 605 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 TMEM169Q96HH4 297 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 EXOC2Q96KP1 924 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 MID1IP1Q9NPA3 183 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 PFDN4Q9NQP4 134 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
ECM1-202ENST00000369047 H3BMM5 538 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 UBXN8O00124 270 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 PRRG1O14668 218 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 KLK8O60259 260 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CD160O95971 181 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 IRF1P10914 325 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 PTGER3P43115 390 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 PSME3P61289 254 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 LCP2Q13094 533 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 LRP8Q14114 963 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 PTPRNQ16849 979 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 SETMARQ53H47 684 aaPredicted RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 KANK2Q63ZY3 851 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 ANKS6Q68DC2 871 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 RPS27LQ71UM5 84 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 EFL1Q7Z2Z2 1120 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 FBXO39Q8N4B4 442 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 HIPK4Q8NE63 616 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CATSPER1Q8NEC5 780 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 TMA16Q96EY4 203 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 BIRC8Q96P09 236 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CYP2S1Q96SQ9 504 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 NPAS2Q99743 824 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 FEM1AQ9BSK4 669 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 MAGEE1Q9HCI5 957 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 MED16Q9Y2X0 877 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 KIAA1671Q9BY89 1806 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 ANAPC1Q9H1A4 1944 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 SOX1O00570 391 aaPredicted RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 NRP2O60462 931 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 TBL1XO60907 577 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 ESR1P03372 595 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 XRCC1P18887 633 aaPredicted RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 MC4RP32245 332 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CLCQ05315 142 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 TRAP1Q12931 704 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CYHR1Q6ZMK1 362 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 GK5Q6ZS86 529 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 SLC39A11Q8N1S5 342 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 PQLC1Q8N2U9 271 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CARNMT1Q8N4J0 409 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 TTC30BQ8N4P2 665 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 RIN3Q8TB24 985 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 KCNJ9Q92806 393 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 ROPN1LQ96C74 230 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 ASB9Q96DX5 294 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 BTBD9Q96Q07 612 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 GPR21Q99679 349 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 CACNA2D2Q9NY47 1150 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 SUCOQ9UBS9 1254 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 TRMT6Q9UJA5 497 aaKnown RBP13.08□□□□□ -0.32
ECM1-202ENST00000369047 FAM50BQ9Y247 325 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 LZTS1Q9Y250 596 aa13.08□□□□□ -0.32
ECM1-202ENST00000369047 PKP3Q9Y446 797 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms