RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TRMT6Q9UJA5 497 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 RNF112Q9ULX5 631 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
USF1-202ENST00000368020 SOCS5O75159 536 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 MC4RP32245 332 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 HMGCLP35914 325 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 PLK1P53350 603 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 SLC7A9P82251 487 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 MRPS35P82673 323 aaKnown RBP13.94□□□□□ -0.18
USF1-202ENST00000368020 TIAL1Q01085 375 aaKnown RBP eCLIP13.94□□□□□ -0.18
USF1-202ENST00000368020 CACNG1Q06432 222 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 TRAF2Q12933 501 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 MPPE1Q53F39 396 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 UNC50Q53HI1 259 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 ARMC12Q5T9G4 340 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 DHDDSQ86SQ9 333 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 TMEM150AQ86TG1 271 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 TMEM126BQ8IUX1 230 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 ELMOD1Q8N336 334 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 TTC30BQ8N4P2 665 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 PTGR2Q8N8N7 351 aaPredicted RBP13.94□□□□□ -0.18
USF1-202ENST00000368020 C19orf60Q96EN9 201 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 PPP1R36Q96LQ0 422 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 GCNAQ96QF7 691 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 CCT7Q99832 543 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 SLC25A23Q9BV35 468 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 C1QTNF3Q9BXJ4 246 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 OSBPL1AQ9BXW6 950 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 SMPD4Q9NXE4 827 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 DNMT3BQ9UBC3 853 aaKnown RBP13.94□□□□□ -0.18
USF1-202ENST00000368020 PCDHGC4Q9Y5F7 938 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 OR51B4Q9Y5P0 310 aa13.94□□□□□ -0.18
USF1-202ENST00000368020 MTCL1Q9Y4B5 1905 aaKnown RBP13.94□□□□□ -0.18
USF1-202ENST00000368020 LAMA3Q16787 3333 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 HELZP42694 1942 aaKnown RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 BBIP1A8MTZ0 92 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 TMEM233B4DJY2 109 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 FZD6O60353 706 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SKAP2O75563 359 aaPredicted RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 MLYCDO95822 493 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 CD160O95971 181 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 JUNP05412 331 aaKnown RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 FMO4P31512 558 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 IL2P60568 153 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 LCP2Q13094 533 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PTPRNQ16849 979 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 LYPLAL1Q5VWZ2 237 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 HTR3DQ70Z44 454 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 APLFQ8IW19 511 aaPredicted RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 FBXO39Q8N4B4 442 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 CHCHD4Q8N4Q1 142 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 MICAL1Q8TDZ2 1067 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SLC26A7Q8TE54 656 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 RCN3Q96D15 328 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 MOCOSQ96EN8 888 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 MYO19Q96H55 970 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 CYP2S1Q96SQ9 504 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 WDR41Q9HAD4 459 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 VPS51Q9UID3 782 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SH3BP1Q9Y3L3 701 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 ACTL7AQ9Y615 435 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 CPQQ9Y646 472 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SLC30A1Q9Y6M5 507 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 TMEM265A0A087WTH1 108 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 HIDE1A8MVS5 230 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SUPT3HB4E1H0 165 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 E5RI56 91 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 H3BMM5 538 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 KLK8O60259 260 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SNAP91O60641 907 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 SUPT3HO75486 399 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PGLSO95336 258 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 LRG1P02750 347 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PDHA1P08559 390 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PSMD8P48556 350 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 FASTKQ14296 549 aaKnown RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 PTPRCAPQ14761 206 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 GSTA3Q16772 222 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 ZRANB3Q5FWF4 1079 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PIGGQ5H8A4 983 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PLPP4Q5VZY2 271 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 TMEM198Q66K66 360 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 ANKS6Q68DC2 871 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 IRGCQ6NXR0 463 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 PAQR3Q6TCH7 311 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 HACD2Q6Y1H2 254 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 EFHBQ8N7U6 833 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 ARL14EPQ8N8R7 260 aaPredicted RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 RIN3Q8TB24 985 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 NRG4Q8WWG1 115 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 CCDC124Q96CT7 223 aaKnown RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 BIRC8Q96P09 236 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 NUSAP1Q9BXS6 441 aaKnown RBP13.93□□□□□ -0.18
USF1-202ENST00000368020 GPR63Q9BZJ6 419 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 IL21Q9HBE4 155 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
USF1-202ENST00000368020 KIAA1522Q9P206 1035 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms