RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 NFKBIL1Q9UBC1 381 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-202ENST00000367503 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-202ENST00000367503 HOXA2O43364 376 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ABCB7O75027 752 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 AMHP03971 560 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 USP17L7P0C7H9 530 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 MBL2P11226 248 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 POLD2P49005 469 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 POLR2JP52435 117 aaKnown RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 TATDN1Q6P1N9 297 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 GLT6D1Q7Z4J2 308 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ANKRD13BQ86YJ7 626 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CARNMT1Q8N4J0 409 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CERS5Q8N5B7 392 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 MEIOBQ8N635 442 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PIH1D2Q8WWB5 315 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 MRPS31Q92665 395 aaKnown RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 LENG9Q96B70 501 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 TRNT1Q96Q11 434 aaKnown RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ATP13A1Q9HD20 1204 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CATSPERZQ9NTU4 200 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 OPTCQ9UBM4 332 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 FABP12A6NFH5 140 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CSH1P0DML2 217 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CSH2P0DML3 217 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CTSKP43235 329 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CYP4F8P98187 520 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 OGFRL1Q5TC84 451 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 GPRIN3Q6ZVF9 776 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ERMP1Q7Z2K6 904 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PHTF2Q8N3S3 785 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 C1GALT1C1Q96EU7 318 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 SENP8Q96LD8 212 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 LGMNQ99538 433 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 TUBA1CQ9BQE3 449 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CCDC106Q9BWC9 280 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 IKZF4Q9H2S9 585 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ADAM7Q9H2U9 754 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 AHSPQ9NZD4 102 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PHF11Q9UIL8 331 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 NOCTQ9UK39 431 aaKnown RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PLCL2Q9UPR0 1127 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PPP1R11O60927 126 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 GOT1P17174 413 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 MATKP42679 507 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 FBXW4P57775 412 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 C18orf25Q96B23 403 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 TMEM169Q96HH4 297 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ERMAPQ96PL5 475 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 GAD1Q99259 594 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 MAF1Q9H063 256 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 DMAC2Q9NW81 257 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 UCKL1Q9NWZ5 548 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 NOBOXO60393 691 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 CHRNB2P17787 502 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PPP2R1BP30154 601 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 TNFSF9P41273 254 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 PSMD4P55036 377 aaKnown RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 RPL38P63173 70 aaKnown RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ZNF267Q14586 743 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-202ENST00000367503 SYT12Q8IV01 421 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 DNAJB3Q8WWF6 145 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 ABHD16BQ9H3Z7 469 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 POLE4Q9NR33 117 aa12.22□□□□□ -0.45
SHPRH-202ENST00000367503 SPATA31C2B4DYI2 1134 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 BTBD19C9JJ37 291 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 CRYZL1O95825 349 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 PSKH1P11801 424 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 COX7A2P14406 83 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 KLRC2P26717 231 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 FMO4P31512 558 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 SPIBQ01892 262 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 PCBP1Q15365 356 aaKnown RBP eCLIP12.21□□□□□ -0.45
SHPRH-202ENST00000367503 NPTX1Q15818 432 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 STXBP5Q5T5C0 1151 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 LIN54Q6MZP7 749 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 IPCEF1Q8WWN9 437 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-202ENST00000367503 FBXL20Q96IG2 436 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 P2RX7Q99572 595 aaKnown RBP12.21□□□□□ -0.45
SHPRH-202ENST00000367503 AASDHPPTQ9NRN7 309 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 KANSL3Q9P2N6 904 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 KLQ9UEF7 1012 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 ZNF112Q9UJU3 913 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 MKLN1Q9UL63 735 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 TMEM63AO94886 807 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 ENDOD1O94919 500 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 YWHAQP27348 245 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 ZNF404Q494X3 552 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 PLPPR4Q7Z2D5 763 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 RNF180Q86T96 592 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 CPNE8Q86YQ8 564 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 PHF10Q8WUB8 498 aaKnown RBP12.21□□□□□ -0.45
SHPRH-202ENST00000367503 EEF1AKMT1Q8WVE0 214 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 CNPPD1Q9BV87 410 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 SDCBP2Q9H190 292 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 MIEF1Q9NQG6 463 aa12.21□□□□□ -0.45
SHPRH-202ENST00000367503 RCOR3Q9P2K3 495 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-202ENST00000367503 AJAP1Q9UKB5 411 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms