RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 C1QTNF7Q9BXJ2 289 aa17.78■□□□□ 0.44
CLK2-202ENST00000361168 SAYSD1Q9NPB0 183 aa17.78■□□□□ 0.44
CLK2-202ENST00000361168 MRPL40Q9NQ50 206 aaKnown RBP17.78■□□□□ 0.44
CLK2-202ENST00000361168 FAM114A2Q9NRY5 505 aa17.78■□□□□ 0.44
CLK2-202ENST00000361168 MARCH4Q9P2E8 410 aaPredicted RBP17.78■□□□□ 0.44
CLK2-202ENST00000361168 TMEM98Q9Y2Y6 226 aa17.78■□□□□ 0.44
CLK2-202ENST00000361168 HS3ST3A1Q9Y663 406 aa17.78■□□□□ 0.44
CLK2-202ENST00000361168 RGSL1A5PLK6 1076 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 AP3B1O00203 1094 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 PPFIA2O75334 1257 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 LMNAP02545 664 aaKnown RBP17.77■□□□□ 0.44
CLK2-202ENST00000361168 FAM153BP0C7A2 387 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 PSMA3P25788 255 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 ARCN1P48444 511 aaKnown RBP17.77■□□□□ 0.44
CLK2-202ENST00000361168 IRX4P78413 519 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 CDK3Q00526 305 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 PDE1BQ01064 536 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 NFATC2Q13469 925 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 TCEA2Q15560 299 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 FAM153CQ494X1 144 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 TRIM61Q5EBN2 209 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 LAIR1Q6GTX8 287 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 TRAM1L1Q8N609 369 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 OR6P1Q8NGX9 317 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 CFAP36Q96G28 342 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 C9orf72Q96LT7 481 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 TEX101Q9BY14 249 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 ASB8Q9H765 288 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 WDR26Q9H7D7 661 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 RXFP3Q9NSD7 469 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 KLF15Q9UIH9 416 aa17.77■□□□□ 0.44
CLK2-202ENST00000361168 A0A1B0GTW7 788 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 FAM237BA0A1B0GVD1 139 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 A6NNZ2 444 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 SMAPO00193 183 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 TSHRP16473 764 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 HADHAP40939 763 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 KIF19Q2TAC6 998 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 PLA2G2CQ5R387 149 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 DOK6Q6PKX4 331 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 KYAT3Q6YP21 454 aaKnown RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 UNC5AQ6ZN44 842 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 ASCL5Q7RTU5 278 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 MFSD2AQ8NA29 543 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 ZNF398Q8TD17 642 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 KLHDC7BQ96G42 594 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 ZSCAN5AQ9BUG6 496 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 GPR27Q9NS67 375 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 SLC17A6Q9P2U8 582 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 NFKBIL1Q9UBC1 381 aaPredicted RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 SNX11Q9Y5W9 270 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 CABIN1Q9Y6J0 2220 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 DCHS1Q96JQ0 3298 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 H7C0S8 307 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 TLR4O00206 839 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 SPEM2Q0P670 501 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 CRYMQ14894 314 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 SF3A2Q15428 464 aaKnown RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 ZRANB3Q5FWF4 1079 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 TRMT10BQ6PF06 316 aaKnown RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 IFT20Q8IY31 132 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 FRMD8Q9BZ67 464 aaPredicted RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 MRM3Q9HC36 420 aaKnown RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 ZC3H7BQ9UGR2 993 aaKnown RBP17.76■□□□□ 0.43
CLK2-202ENST00000361168 ANKRD6Q9Y2G4 727 aa17.76■□□□□ 0.43
CLK2-202ENST00000361168 PTPRZ1P23471 2315 aaPredicted RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 SLC25A14O95258 325 aaPredicted RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 RETP07949 1114 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 GNSP15586 552 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 SSTR1P30872 391 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 FOXN2P32314 431 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 NUDT1P36639 197 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 VSNL1P62760 191 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 CAV1Q03135 178 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 DNAJC21Q5F1R6 531 aaKnown RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 ADAMTSL4Q6UY14 1074 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 CENPUQ71F23 418 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 NLRP8Q86W28 1048 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 RAVER1Q8IY67 606 aaKnown RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 GLYATL1Q969I3 302 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 TSACCQ96A04 125 aaPredicted RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 COX14Q96I36 57 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 LOXL4Q96JB6 756 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 BOCQ9BWV1 1114 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 IRF2BPLQ9H1B7 796 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 TCEAL2Q9H3H9 227 aaPredicted RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 CAPN10Q9HC96 672 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 FGF22Q9HCT0 170 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 PARD6AQ9NPB6 346 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 PRKAB1Q9Y478 270 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.75■□□□□ 0.43
CLK2-202ENST00000361168 ADAMTS9Q9P2N4 1935 aa17.75■□□□□ 0.43
CLK2-202ENST00000361168 VILLO15195 856 aa17.74■□□□□ 0.43
CLK2-202ENST00000361168 PGAM1P18669 254 aa17.74■□□□□ 0.43
CLK2-202ENST00000361168 NXPH1P58417 271 aa17.74■□□□□ 0.43
CLK2-202ENST00000361168 PRAMEP78395 509 aa17.74■□□□□ 0.43
CLK2-202ENST00000361168 FZD2Q14332 565 aa17.74■□□□□ 0.43
CLK2-202ENST00000361168 MARK2Q7KZI7 788 aaKnown RBP17.74■□□□□ 0.43
CLK2-202ENST00000361168 NLRP9Q7RTR0 991 aa17.74■□□□□ 0.43
CLK2-202ENST00000361168 OR4L1Q8NH43 312 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms